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Tdark
NUP62CL
Nucleoporin-62 C-terminal-like protein

Protein Summary
Description
This gene encodes a protein containing a domain found in nucleoporins which are glycoproteins found in nuclear pore complexes. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2011]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000372466
  • ENSP00000361544
  • ENSG00000198088
  • ENST00000484614
  • ENSP00000433269

Symbol
  • NUP62L
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
tissue sample
0.74
histone modification site profile
0.69
cell type or tissue
0.66
tissue
0.65
cellular component
0.61


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.47   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 32   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.47   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 32   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 2
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (70)
NUP58
Tbio
Novelty:  0.08797454
p_int:  0.999999994
p_ni:  6e-9
Score:  0.85
Data Source:  BioPlex,STRINGDB
TET3
Tbio
Family:  Enzyme
Novelty:  0.00557444
p_int:  0.999999915
p_ni:  1.1e-8
p_wrong:  7.4e-8
Data Source:  BioPlex
NPHP3
Tbio
Novelty:  0.02857926
p_int:  0.999999871
p_ni:  1.29e-7
Data Source:  BioPlex
NUP88
Tbio
Novelty:  0.02483503
p_int:  0.999994211
p_ni:  0.000003482
p_wrong:  0.000002308
Score:  0.741
Data Source:  BioPlex,STRINGDB
ZNF518A
Tdark
Novelty:  1.30119746
p_int:  0.999986085
p_ni:  0.000013911
p_wrong:  3e-9
Data Source:  BioPlex
BPTF
Tchem
Family:  Epigenetic
Novelty:  0.00826037
p_int:  0.999985977
p_ni:  0.000014023
Data Source:  BioPlex
TET2
Tchem
Family:  Enzyme
Novelty:  0.00141899
p_int:  0.999975413
p_ni:  0.000004204
p_wrong:  0.000020383
Data Source:  BioPlex
HIVEP2
Tbio
Family:  TF
Novelty:  0.0290218
p_int:  0.999952299
p_ni:  0.000041688
p_wrong:  0.000006013
Data Source:  BioPlex
NAV1
Tbio
Novelty:  0.00444608
p_int:  0.999598981
p_ni:  0.000399825
p_wrong:  0.000001194
Data Source:  BioPlex
MAP7
Tbio
Novelty:  0.01976296
p_int:  0.998654663
p_ni:  0.001345336
p_wrong:  1e-9
Data Source:  BioPlex
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (1)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
1
6
0
2.2
97.4
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
0
2.2
97.4
IDG Resources
No IDG generated resources found
Publication Statistics
PubMed Score 1.47
PubMed score by year
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Related Publications
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PMID
Year
Title