Leukemia NUP98 fusion partner 1

Property Summary

NCBI Gene PubMed Count	3
PubMed Score	85.84

PubTator Score	21.93

Knowledge Summary

Patent

No data available

TINX Plot

Disease (1)

Expression Atlas

Disease	Target Count	P-value
adult high grade glioma	3801	3.1e-05
atypical teratoid / rhabdoid tumor	5112	3.3e-05
ependymoma	4679	1.6e-03
astrocytic glioma	2597	4.9e-03
oligodendroglioma	2850	5.7e-03

Differential Expression (5)

Disease	log2 FC	p
adult high grade glioma	-1.200	3.1e-05
astrocytic glioma	-1.400	4.9e-03
atypical teratoid / rhabdoid tumor	-1.200	3.3e-05
ependymoma	-1.700	1.6e-03
oligodendroglioma	-1.300	5.7e-03

Testis 18,518

Artery - Coronary 17,949

Brain - Cerebellar Hemisphere 18,015

Artery - Aorta 17,896

Brain - Frontal Cortex (BA9) 18,069

Brain - Nucleus accumbens (basal ganglia... 18,024

Pituitary 18,147

Brain - Cerebellum 17,983

Artery - Tibial 17,631

Brain - Cortex 18,039

Brain - Caudate (basal ganglia) 18,001

Uterus 17,618

Brain - Hypothalamus 18,169

Brain - Anterior cingulate cortex (BA24) 17,989

Ovary 17,971

Brain - Putamen (basal ganglia) 17,863

Brain - Spinal cord (cervical c-1) 17,973

Brain - Amygdala 18,006

Thyroid 18,024

Colon - Sigmoid 18,089

Nerve - Tibial 18,007

Lung 18,057

Heart - Atrial Appendage 17,896

Brain - Hippocampus 18,011

Brain - Substantia nigra 17,981

Vagina 17,834

Esophagus - Muscularis 18,017

Esophagus - Gastroesophageal Junction 18,000

Adipose - Visceral (Omentum) 17,937

Breast - Mammary Tissue 18,103

Stomach 17,879

Cells - Transformed fibroblasts 17,577

Cells - EBV-transformed lymphocytes 18,186

Adipose - Subcutaneous 18,110

Prostate 18,213

Muscle - Skeletal 17,778

Minor Salivary Gland 18,005

Spleen 17,614

Liver 18,071

Kidney - Cortex 17,329

Small Intestine - Terminal Ileum 17,954

Adrenal Gland 18,071

Colon - Transverse 17,825

Skin - Sun Exposed (Lower leg) 17,968

Skin - Not Sun Exposed (Suprapubic) 18,081

Heart - Left Ventricle 18,006

Pancreas 18,123

Esophagus - Mucosa 18,076

Whole Blood 17,439

Adult Retina 10,115

Retina

adipose tissue 15,837

adrenal gland 15,963

appendix 16,247

bone marrow 14,571

breast 16,063

cerebral cortex 16,630

cervix, uterine 15,871

colon 15,959

duodenum 15,975

endometrium 16,349

epididymis 15,863

esophagus 15,898

fallopian tube 16,245

gallbladder 16,333

heart muscle 14,972

kidney 15,917

liver 14,587

lung 16,312

lymph node 15,833

ovary 15,408

pancreas 14,070

parathyroid gland 14,769

placenta 15,937

prostate 16,460

rectum 15,705

salivary gland 14,981

seminal vesicle 15,918

skeletal muscle 14,011

skin 16,206

small intestine 16,154

smooth muscle 15,857

spleen 15,972

stomach 16,099

testis 17,936

thyroid gland 15,959

tonsil 15,400

urinary bladder 15,814

Liver and Pancreas 16,750

Digestive Tract 17,369

Urinary Tract 16,678

Endocrine System 18,159

Blood and immune system 16,909

Respiratory system 16,393

Female tissues 17,400

Male tissues 17,142

Skin and soft tissues 17,230

Nervous System 16,725

Cardiovascular System 15,192

See source...

Vagina 93

Interalveolar septum 2

See source...

Synonym

Accession	A1A4G5 B7ZLT3
Symbols	NP3

Gene

LNP1

Ortholog (11)

Species	Source	Disease
Cow 15,320	Inparanoid OMA EggNOG
Horse 14,252	OMA EggNOG
Opossum 12,230	Inparanoid OMA EggNOG
Pig 10,168	OMA EggNOG
Chicken 7,827	Inparanoid OMA EggNOG
Platypus 5,703	Inparanoid OMA EggNOG
Anole lizard 10,588	Inparanoid OMA
Macaque 12,761	Inparanoid OMA EggNOG
Chimp 14,140	OMA EggNOG
Dog 15,073	Inparanoid OMA EggNOG
Rat 15,117	Inparanoid OMA EggNOG

UniProt Keyword (3)

Complete proteome 20,231

Reference proteome 20,231

Chromosomal rearrangement 324

Compartment GO Term (3)

Cytosol 6,686

Nuclear speckles 412

Vesicles 1,613

HCA RNA Cell Line (56)

A-431 16,131

A549 15,174

AF22 16,160

AN3-CA 15,648

ASC TERT1 14,842

BEWO 16,726

BJ 15,448

BJ hTERT+ 15,353

BJ hTERT+ SV40 Large T+ 15,609

BJ hTERT+ SV40 Large T+ RasG12V 15,493

See all...

Protein-protein Interaction (13)

YWHAQ YWHAB YWHAG YWHAE YWHAZ YWHAH PITRM1 TRPC4AP NUDT12 NDUFAF5 PM20D2 AHCYL2 GLUL

AA Sequence

MEHKDDDDDDVSFAKWMSSFWGHSWREEDQRGLRERHRLQATSHRKTSLPCPLPVLPRIPSSDCHPRRHS      1 - 70
HEDQEFRCRSHVRDYRKYSEDGSFKEPLESKGRSHSKIEKFSESFERQLCFRTKRSASLGPESRKERNER     71 - 140
ECLRMEIKSRKKVEEERSSRKEEHGEAHMAPLFEKGPE                                    141 - 178
//

Text Mined References (4)

Summary
Details

	PMID	Year	Title

Tdark Leukemia NUP98 fusion partner 1 Add to cart View Collections Empty Collection