ZSWIM6
Zinc finger SWIM domain-containing protein 6
Protein Summary
The protein encoded by this gene contains a zinc finger SWI2/SNF2 and MuDR (SWIM) domain. Proteins with SWIM domains have been found in a diverse number of species and are predicted to interact with DNA or proteins. Mutations in this gene result in acromelic frontonasal dysostosis. [provided by RefSeq, Apr 2017]
- ENST00000252744
- ENSP00000252744
- ENSG00000130449
- KIAA1577
- AFND
- NEDMAGA
Most Knowledge About | Knowledge Value
(0 to 1 scale) | ||
|---|---|---|---|
transcription factor perturbation | 0.96 | ||
virus perturbation | 0.83 | ||
histone modification site profile | 0.74 | ||
transcription factor binding site profile | 0.73 | ||
microRNA | 0.62 | ||
Protein Classes
IDG Development Level Summary
These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
Pubmed score: 9.64 (req: < 5)
Gene RIFs: 3 (req: <= 3)
Antibodies: 87 (req: <= 50)
These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
Pubmed score: 9.64 (req: >= 5)
Gene RIFs: 3 (req: > 3)
Antibodies: 87 (req: > 50)
- OR - satisfy the following criterion:
Gene Ontology Terms: 2
Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions
Active Ligand: 0
Target has at least one approved drug - AND - satisfies the preceding conditions
Active Drug: 0
Expression Data (0 Tissues)
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
Active Ligands (0)
Protein-Protein Interactions (34)
GLMN
Novelty: 0.01940401
p_int: 0.999999469
p_ni: 1e-9
p_wrong: 5.3e-7
Score: 0.237
Data Source: BioPlex,STRINGDB
Nearest Tclin Targets
Pathways (0)
Viral Interactions (0)
Gene Ontology Terms (3)
Functions (1)
Components (1)
Processes (1)
GO Term | Evidence | Assigned by | ||
|---|---|---|---|---|
Inferred from Electronic Annotation (IEA) | InterPro | |||
Disease Associations (null)
GWAS Traits (15)
Items per page:
1 – 5 of 15
GWAS Trait | EFO ID | Study Count | SNP Count | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
|---|---|---|---|---|---|---|---|---|---|
mathematical ability | 4 | 4 | 5 | 92.5 | |||||
self reported educational attainment | 5 | 5 | 6 | 1 | 92.3 | ||||
household income | 2 | 8 | 11 | 91.5 | |||||
platelet count | 3 | 3 | 2 | 5.1 | 89.9 | ||||
10 | 9 | 3 | 1.1 | 82.9 | |||||
Items per page:
1 – 5 of 15
GWAS Trait | EFO ID | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
|---|---|---|---|---|---|---|---|
mathematical ability | 5 | 92.5 | |||||
self reported educational attainment | 6 | 1 | 92.3 | ||||
household income | 11 | 91.5 | |||||
platelet count | 2 | 5.1 | 89.9 | ||||
3 | 1.1 | 82.9 | |||||
Find similar targets by:
IDG Resources
Orthologs (9)
1 – 5 of 9
Species | Name | Source ID | Gene ID | OMA | EggNOG | Inparanoid | ||
|---|---|---|---|---|---|---|---|---|
Mouse | MGI:1914513 | 67263 | ||||||
Rat | RGD:1306624 | 310062 | ||||||
Dog | zinc finger SWIM-type containing 6 | VGNC:48859 | 478068 | |||||
Horse | zinc finger SWIM-type containing 6 | VGNC:25423 | 100060125 | |||||
Cow | zinc finger SWIM-type containing 6 | VGNC:37386 | 538841 | |||||
Species | Name | OMA | EggNOG | Inparanoid | ||
|---|---|---|---|---|---|---|
Mouse | ||||||
Rat | ||||||
Dog | zinc finger SWIM-type containing 6 | |||||
Horse | zinc finger SWIM-type containing 6 | |||||
Cow | zinc finger SWIM-type containing 6 | |||||
Publication Statistics
PubMed Score 9.64
PubMed score by year
PubTator Score 2.70
PubTator score by year
Related Publications
Text Mined References (12)
GeneRif Annotations (3)
Items per page:
0 of 0
PMID | Year | Title |
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