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Tbio
YDJC
Carbohydrate deacetylase

Protein Summary
Description
Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000292778
  • ENSP00000292778
  • ENSG00000161179
  • ENST00000398873
  • ENSP00000381847
  • ENST00000415762
  • ENSP00000402481
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
transcription factor binding site profile
0.76
tissue sample
0.6
cell type or tissue
0.58
histone modification site profile
0.57
cell line
0.49


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5.44   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 64   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5.44   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 64   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 3
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (14)
PCMT1
Tbio
Family:  Enzyme
Novelty:  0.01414946
p_int:  0.999999944
p_ni:  4.4e-8
p_wrong:  1.1e-8
Score:  0.217
Data Source:  BioPlex,STRINGDB
ARSG
Tbio
Family:  Enzyme
Novelty:  0.04412917
p_int:  0.999232978
p_ni:  0.000057457
p_wrong:  0.000709565
Score:  0.187
Data Source:  BioPlex,STRINGDB
CDC16
Tbio
Novelty:  0.00916715
p_int:  0.856709685
p_ni:  0.000849902
p_wrong:  0.142440413
Score:  0.253
Data Source:  BioPlex,STRINGDB
NAXD
Tbio
Family:  Enzyme
Novelty:  0.07681941
Score:  0.794
Data Source:  STRINGDB
GAL
Tbio
Novelty:  0.0005132
Score:  0.555
Data Source:  STRINGDB
GBGT1
Tbio
Family:  Enzyme
Novelty:  0.0697386
Score:  0.514
Data Source:  STRINGDB
ZMIZ1
Tbio
Family:  TF
Novelty:  0.02324732
Score:  0.479
Data Source:  STRINGDB
UBE2L3
Tbio
Novelty:  0.01188211
Score:  0.477
Data Source:  STRINGDB
PRRC2A
Tbio
Novelty:  0.01493149
Score:  0.453
Data Source:  STRINGDB
THEMIS
Tbio
Novelty:  0.11304988
Score:  0.441
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (37)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
high density lipoprotein cholesterol measurement
10
8
16
97.3
mean corpuscular hemoglobin concentration
4
4
4
97.2
lymphocyte count
3
3
3
96.6
mean corpuscular volume
4
4
4
93.6
red blood cell distribution width
4
3
4
92.9
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
high density lipoprotein cholesterol measurement
16
97.3
mean corpuscular hemoglobin concentration
4
97.2
lymphocyte count
3
96.6
mean corpuscular volume
4
93.6
red blood cell distribution width
4
92.9
Find similar targets by:
IDG Resources
No IDG generated resources found
Orthologs (11)
1 – 5 of 11
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Macaque
YdjC chitooligosaccharide deacetylase homolog
719827
Mouse
MGI:1916351
69101
Rat
RGD:1359227
287938
Dog
YdjC chitooligosaccharide deacetylase homolog
VGNC:48481
100685573
Horse
YdjC chitooligosaccharide deacetylase homolog
VGNC:50987
100146658
Species
Name
OMA
EggNOG
Inparanoid
Macaque
YdjC chitooligosaccharide deacetylase homolog
Mouse
Rat
Dog
YdjC chitooligosaccharide deacetylase homolog
Horse
YdjC chitooligosaccharide deacetylase homolog
Publication Statistics
PubMed Score 5.44
PubMed score by year
PubTator Score 0.38
PubTator score by year
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Related Publications
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PMID
Year
Title