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Download Data for TIGIT
Description of the protein which includes the UniProt Function and the NCBI Gene Summary.
Uniprot linked accession values, symbols or commonly used abbreviations associated with this particular target.
Approved gene symbol with link to HUGO Gene Nomenclature Committee.
Ensembl identifier links.
List of abbreviations or acronyms of the full target name.
Radar plot depicting the variety of knowledge obtained by Pharos for a particular target. The more spikes in the plot, the more variety. The longer the length, the higher the quantity of that particular knowledge. Clicking the illumination graph opens an expanded view to explore the plot fuller by seeing plot with annotations of the different radii.
Table representing the top 5 knowledge attributes in the illumination graph. The knowledge value property is on a scale of 0 to 1.
Gene symbols, accession ids and various other target identifiers. Also contains the illumination graph which highlights the amount of knowledge available. Click the "?" for more details.
click for section description and definitions
Hierarchical classifications for this protein from different ontologies. Click the "?" for more details.
Descriptions of the IDG illumination levels, highlighting the milestones attained in research for this target. Click the "?" for more details.
Jensen Lab generated fractional counting score for the prevalence of this gene in Pubmed articles.
Total count of NCBI Gene Reference Into Function hits for target listed in parenthesis, and summary table with links to publications per PMID with the specific text in article that includes the reported target.
Number of antibodies for this target listed in antibodypedia.com
Number of Gene Ontology (GO) annotations for this target, consisting of the sum of GO Functions and GO Processes.
Ligands associated with a target, listed in ChEMBL, with activity over a cutoff relative to the targetclass.
Approved drugs associated with a target.
Expression data from several sources shown as a heatmap of tissues and data sources, and as a shaded anatomogram. Click the "?" for more details.
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Select a tissue in the dropdown above, or on the Circle Plot, or on the Anatomagram to filter the heatmap.
Click the header labels to sort by a different data source.
Bar chart summarizing the number of times each residue appears in the sequence. The bars represent the actual counts, while the gold lines represent the expected counts given the frequency of the amino acids in all human genes.
Amino acid sequence of the target protein.
Begin a sequence search with this sequence
The protein sequence aligned with structural and functional annotations, as well as disease variants.
Amino acid sequence, and a detailed sequence structure viewer via the Uniprot Protvista viewer. Click the "?" for more details.
https://unmtid-shinyapps.net/shiny/tiga/?gene=ENSG00000181847
https://genevatool.org/gene_table?gene_name=TIGIT
https://glygen.org/protein/Q495A1
https://maayanlab.cloud/archs4/gene/TIGIT
A list of related tools that have content for this protein. Click the "?" for more details.
List of protein-protein interactions associated with this gene. Interactions are reported from Reactome, BioPlex, and StringDB. StringDB score must be above 0.400 to be shown here. Explore on the String-DB website to see lower likelihood targets. Click the "?" for more details.
D-2-hydroxyglutarate dehydrogenase, mitochondrial
A broad classification of protein families
TIN-X metric for the relative scarcity of specific publications for this target.
BioPlex score representing the probability of the protein protein interaction.
BioPlex score representing the probability that the interaction detected was non-specific.
Data Sources reporting this protein-protein interaction.
Palmitoyltransferase ZDHHC6
DNA annealing helicase and endonuclease ZRANB3
BioPlex score representing the probability that the interacting protein was wrongly identified.
Ufm1-specific protease 2
E3 ubiquitin-protein ligase Itchy homolog
Cell division control protein 6 homolog
Phospholipid-transporting ATPase ID
Rho-related BTB domain-containing protein 3
Protein FAM171A2
Podocalyxin-like protein 2
Opens the Target List with this set of targets
A listing of the nearest upstream and downstream targets from KEGG pathways that have reached the Tclin designation. Click the "?" for more details.
Biochemical pathways containing the current target. Click the "?" for more details.
Pathways and diagrams from Reactome.
Find Targets with an overlapping set of KEGG Pathways
Explore pathways that functionally interact with your target of interest. These interacting pathways are inferred based on functional interactions selected according to the provided cutoff. The functional interactions are predicted using a trained machine learning model, employing a list of protein/gene pairwise relationships. Click the "?" for more details.
Details about predicted viral interactions with this protein, from P-HIPSTer. Click the "?" for more details.
Taxonomy ID
Family
Genus
Species
NCBI
finalLR
Virus type
Find Targets with an overlapping set of Interacting Viruses
A network of biological classes describing the molecular function, cellular locations, and processes genes may carry out, as defined by the Gene Ontology Consortium. Click the "?" for more details.
Find Targets with an overlapping set of GO Functions
Find Targets with an overlapping set of GO Components
Find Targets with an overlapping set of GO Processes
Function terms describe molecular activities performed by gene products. Terms may be broad, such as "catalytic activity" or narrow, such as "adenylate cyclase activity".
Component terms describe locations relative to cellular structures in which a gene product performs a function.
Process terms describe larger "biological programs" accomplished by multiple molecular activities. Like Functions, Process terms can be broad, such as "DNA repair", or narrow, such as "pyrimidine nucleobase biosynthetic process".
Data sources for this disease. Click for details.
This is a list of diseases associated with this target, compiled by several resources. Each
resource provides different confidence measurements and association values, which are described below. Click the "?" for more details.
Identifier the data source is using for this disease association.
A measure from JensenLab Text Mining quantifying the strength of the association between the disease and the target.
A measure from the JensenLab data sources quantifying the confidence in the association between the disease and the target.
Based on data from Expression Atlas, this measure quantifies the change in expression between the disease and non-disease states which yielded this association between disease and target.
The significance of the association between disease and target based on the Expression Atlas log2foldchange.
Opens the Disease List with this set of diseases
Find Targets with an overlapping set of Associated Disease
TIN-X is an interactive visualization tool for discovering interesting associations between diseases and potential drug targets.
Select a point on the scatter plot, or a circle on the circle plot to change the highlighting.
Genome-wide association studies (GWAS) find associations between phenotypic traits and genes. Target Illumination GWAS Analytics (TIGA) scores and ranks those traits according to a subset of study parameters. Click the "?" for more details.
Occurrence of this target in up to 10 categories of UniProt keywords.
Find Targets with an overlapping set of UniProt Keywords
Occurrence of this target in up to 10 categories of GWAS Traits.
Find Targets with an overlapping set of GWAS Traits
Occurrence of this target in up to 10 categories of JAX/MGI Phenotypes.
Find Targets with an overlapping set of MGI Phenotypes
List of targets within Pharos that are related to this target. Click the "?" for more details.
Reagents and data sources generated by IDG partner organizations Click the "?" for more details.
Orthologous proteins from other species, from OMA, EggNOG, and Inparanoid. Click the "?" for more details.
Statistics about the occurence of this target in literature, extracted via text mining. GeneRIFs,and text-mined publications are also displayed. Click the "?" for more details.
The Pubmed Score (also sometimes referred to as the Jensen Score) is
derived from text mining a set of Pubmed abstracts.
Timeline of pubtator scores for each available year.
Download Publications
Download GeneRIFs
This component shows publications, as determined by manual curation and entity matching to text in the title or abstract. Displayed data is from NCBI. Additional references based on entity matching to the abstracts and full text (when available) from JensenLab is available in the download. Click the "?" for more details.