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Tdark
SPANXN1
Sperm protein associated with the nucleus on the X chromosome N1

Protein Summary
Description
This gene represents one of several duplicated family members that are located on chromosome X. This gene family encodes proteins that play a role in spermiogenesis. These proteins represent a specific subgroup of cancer/testis-associated antigens, and they may be candidates for tumor vaccines. This family member belongs to a subgroup of related genes that are present in all primates and rats and mice, and thus, it represents one of the ancestral family members. [provided by RefSeq, May 2010]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000370493
  • ENSP00000359524
  • ENSG00000203923

Symbol
  • CT11.6
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
cellular component
0.52
tissue
0.43
cell line
0.36
disease
0.25
microRNA
0.24


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.15   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 0   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.15   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 0   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (3)
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (18)
SSX7
Tdark
Novelty:  3.926097
Score:  0.669
Data Source:  STRINGDB
XAGE3
Tdark
Novelty:  0.1418603
Score:  0.583
Data Source:  STRINGDB
MAGEB6
Tdark
Novelty:  1.14058608
Score:  0.574
Data Source:  STRINGDB
MAGEB4
Tdark
Novelty:  0.2709865
Score:  0.566
Data Source:  STRINGDB
CT55
Tdark
Novelty:  0.20854606
Score:  0.556
Data Source:  STRINGDB
ACTL8
Tbio
Novelty:  0.16913978
Score:  0.551
Data Source:  STRINGDB
SSX5
Tdark
Novelty:  0.36919268
Score:  0.53
Data Source:  STRINGDB
CT83
Tbio
Novelty:  0.08801499
Score:  0.53
Data Source:  STRINGDB
ZNF165
Tbio
Family:  TF
Novelty:  0.0871376
Score:  0.511
Data Source:  STRINGDB
SLCO6A1
Tbio
Family:  Transporter
Novelty:  0.07836028
Score:  0.499
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (0)
No GO Terms found
Disease Associations (null)
No disease associations found
GWAS Traits (0)
No GWAS traits found
IDG Resources
No IDG generated resources found
Orthologs
No orthologs found
Publication Statistics
PubMed Score 1.15
PubMed score by year
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Related Publications
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PMID
Year
Title