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Tdark
SNX30
Sorting nexin-30

Protein Summary
Description
May be involved in several stages of intracellular trafficking.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000374232
  • ENSP00000363349
  • ENSG00000148158

Symbol
  • ATG24A
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
transcription factor binding site profile
0.82
transcription factor
0.73
histone modification site profile
0.7
cell type or tissue
0.68
tissue sample
0.67


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 0.21   (req: < 5)
Gene RIFs: 1   (req: <= 3)
Antibodies: 93   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 0.21   (req: >= 5)
Gene RIFs: 1   (req: > 3)
Antibodies: 93   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 2
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (3)
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (31)
SNX4
Tbio
Novelty:  0.05441145
p_int:  1
Score:  0.747
Data Source:  BioPlex,STRINGDB
MECR
Tbio
Family:  Enzyme
Novelty:  0.01395965
p_int:  0.999917257
p_ni:  0.000037877
p_wrong:  0.000044866
Data Source:  BioPlex
SNX32
Tdark
Novelty:  0.66136036
Score:  0.651
Data Source:  STRINGDB
SNX6
Tbio
Novelty:  0.05909848
Score:  0.633
Data Source:  STRINGDB
VPS35
Tbio
Novelty:  0.00729892
Score:  0.6
Data Source:  STRINGDB
VPS29
Tbio
Novelty:  0.01335106
Score:  0.573
Data Source:  STRINGDB
VPS26A
Tbio
Novelty:  0.01804654
Score:  0.531
Data Source:  STRINGDB
VPS26B
Tdark
Novelty:  0.25702869
Score:  0.531
Data Source:  STRINGDB
ULK1
Tchem
Family:  Kinase
Novelty:  0.00240301
Score:  0.52
Data Source:  STRINGDB
ULK3
Tchem
Family:  Kinase
Novelty:  0.0783598
Score:  0.52
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (0)
No GWAS traits found
IDG Resources
No IDG generated resources found
Orthologs (14)
1 – 5 of 14
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
sorting nexin family member 30
VGNC:13967
464666
Macaque
sorting nexin family member 30
710803
Mouse
MGI:2443882
209131
Rat
RGD:1311367
298033
Dog
sorting nexin family member 30
VGNC:46637
481672
Species
Name
OMA
EggNOG
Inparanoid
Chimp
sorting nexin family member 30
Macaque
sorting nexin family member 30
Mouse
Rat
Dog
sorting nexin family member 30
Publication Statistics
PubMed Score 0.21
PubMed score by year
PubTator Score 2.45
PubTator score by year
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Related Publications
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0 of 0
PMID
Year
Title