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Tbio
SNX29
Sorting nexin-29

Protein Summary
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000566228
  • ENSP00000456480
  • ENSG00000048471

Symbol
  • RUNDC2A
  • RUNDC2A
  • A-388D4.1
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
histone modification site profile
0.89
trait
0.86
transcription factor
0.86
transcription factor binding site profile
0.74
transcription factor perturbation
0.74


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.25   (req: < 5)
Gene RIFs: 3   (req: <= 3)
Antibodies: 121   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.25   (req: >= 5)
Gene RIFs: 3   (req: > 3)
Antibodies: 121   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 1
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (27)
AP2M1
Tbio
Novelty:  0.00769368
p_int:  0.999999266
p_ni:  6.72e-7
p_wrong:  6.2e-8
Score:  0.191
Data Source:  BioPlex,STRINGDB
TRAF1
Tbio
Novelty:  0.00526776
p_int:  0.99999853
p_ni:  0.000001386
p_wrong:  8.4e-8
Score:  0.228
Data Source:  BioPlex,STRINGDB
DISC1
Tbio
Novelty:  0.00183442
p_int:  0.98541094
p_ni:  0.000352957
p_wrong:  0.014236103
Data Source:  BioPlex
FAM43A
Tdark
Novelty:  1.17401589
Score:  0.719
Data Source:  STRINGDB
SNX22
Tdark
Novelty:  0.26806147
Score:  0.622
Data Source:  STRINGDB
CCBE1
Tbio
Novelty:  0.03290164
Score:  0.608
Data Source:  STRINGDB
SNX20
Tbio
Novelty:  0.28934317
Score:  0.593
Data Source:  STRINGDB
SNX11
Tbio
Novelty:  0.21586113
Score:  0.585
Data Source:  STRINGDB
SNX24
Tbio
Novelty:  0.20838126
Score:  0.572
Data Source:  STRINGDB
SNX10
Tbio
Novelty:  0.04148958
Score:  0.544
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (24)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
self reported educational attainment
2
3
3
86.2
educational attainment
1
5
5
83.1
intelligence
4
5
2
5.6
77.5
reticulocyte measurement
3
2
4
70.5
1
1
0
1.1
60.5
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
self reported educational attainment
3
86.2
educational attainment
5
83.1
intelligence
2
5.6
77.5
reticulocyte measurement
4
70.5
0
1.1
60.5
Find similar targets by:
IDG Resources
No IDG generated resources found
Publication Statistics
PubMed Score 6.25
PubMed score by year
PubTator Score 0.89
PubTator score by year
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Related Publications
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PMID
Year
Title