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Tbio
SDF2L1
Stromal cell-derived factor 2-like protein 1

Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 8.49   (req: < 5)
Gene RIFs: 3   (req: <= 3)
Antibodies: 90   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 8.49   (req: >= 5)
Gene RIFs: 3   (req: > 3)
Antibodies: 90   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 5
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (61)
VWA1
Tbio
Novelty:  0.00212445
p_int:  0.999992017
p_ni:  0.000007982
p_wrong:  1e-9
Score:  0.28
Data Source:  BioPlex,STRINGDB
DNAJB11
Tbio
Novelty:  0.02588745
p_int:  0.997483276
p_ni:  0.002516724
Score:  0.923
Data Source:  BioPlex,STRINGDB
PSG1
Tbio
Novelty:  0.0239046
p_int:  0.995922656
p_ni:  0.004077344
Data Source:  BioPlex
PROZ
Tbio
Family:  Enzyme
Novelty:  0.05629679
p_int:  0.995495628
p_ni:  0.004504372
Data Source:  BioPlex
EMC10
Tbio
Novelty:  0.04986528
p_int:  0.988992725
p_ni:  0.007173808
p_wrong:  0.003833467
Score:  0.238
Data Source:  BioPlex,STRINGDB
WNT7A
Tbio
Novelty:  0.00421662
p_int:  0.957426484
p_ni:  0.042573516
Data Source:  BioPlex
OLFM2
Tbio
Novelty:  0.06929963
p_int:  0.95627557
p_ni:  0.04372443
Data Source:  BioPlex
CLIC1
Tbio
Family:  IC
Novelty:  0.00622691
p_int:  0.946825428
p_ni:  0.053174572
Score:  0.267
Data Source:  BioPlex,STRINGDB
WNT5A
Tbio
Novelty:  0.00125563
p_int:  0.944537635
p_ni:  0.055462365
Score:  0.169
Data Source:  BioPlex,STRINGDB
ZPLD1
Tbio
Novelty:  0.19418088
p_int:  0.943360165
p_ni:  0.056639835
Score:  0.183
Data Source:  BioPlex,STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (37)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
high density lipoprotein cholesterol measurement
10
8
16
97.3
mean corpuscular hemoglobin concentration
4
4
4
97.2
lymphocyte count
3
3
3
96.6
mean corpuscular volume
4
4
4
93.6
red blood cell distribution width
4
3
4
92.9
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
high density lipoprotein cholesterol measurement
16
97.3
mean corpuscular hemoglobin concentration
4
97.2
lymphocyte count
3
96.6
mean corpuscular volume
4
93.6
red blood cell distribution width
4
92.9
Find similar targets by:
IDG Resources
No IDG generated resources found
Orthologs (13)
1 – 5 of 13
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
stromal cell derived factor 2 like 1
VGNC:6710
748075
Macaque
stromal cell derived factor 2 like 1
697928
Mouse
MGI:2149842
64136
Rat
RGD:1585844
680945
Dog
stromal cell derived factor 2 like 1
VGNC:52966
608633
Species
Name
OMA
EggNOG
Inparanoid
Chimp
stromal cell derived factor 2 like 1
Macaque
stromal cell derived factor 2 like 1
Mouse
Rat
Dog
stromal cell derived factor 2 like 1
Publication Statistics
PubMed Score 8.49
PubMed score by year
PubTator Score 2.33
PubTator score by year
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Related Publications
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PMID
Year
Title