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Tdark
SAMD1
Atherin

Protein Summary
Description
May play a role in atherogenesis by immobilizing LDL in the atherial wall.
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
ligand (protein) perturbation
1
drug perturbation
0.87
histone modification site profile
0.79
protein complex
0.67
cell line
0.52


IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5.14   (req: < 5)
Gene RIFs: 2   (req: <= 3)
Antibodies: 0   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5.14   (req: >= 5)
Gene RIFs: 2   (req: > 3)
Antibodies: 0   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (3)
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (67)
L3MBTL3
Tchem
Family:  Epigenetic
Novelty:  0.04659049
p_int:  0.999998112
p_ni:  0.000001888
Score:  0.834
Data Source:  BioPlex,STRINGDB
PRMT2
Tbio
Family:  Epigenetic
Novelty:  0.04121581
p_int:  0.999897933
p_ni:  0.000102067
Score:  0.589
Data Source:  BioPlex,STRINGDB
P4HA1
Tchem
Family:  Enzyme
Novelty:  0.01624726
p_int:  0.999888767
p_ni:  0.000111185
p_wrong:  4.8e-8
Data Source:  BioPlex
CCDC102B
Tdark
Novelty:  0.28075569
p_int:  0.998364123
p_ni:  0.001635877
Data Source:  BioPlex
DPPA4
Tbio
Novelty:  0.05764302
p_int:  0.996031595
p_ni:  0.003968405
Data Source:  BioPlex
IL13RA2
Tbio
Novelty:  0.03465642
p_int:  0.995850923
p_ni:  0.004149077
Data Source:  BioPlex
LY86
Tbio
Novelty:  0.00314575
p_int:  0.99515147
p_ni:  0.004848464
p_wrong:  6.7e-8
Data Source:  BioPlex
C6orf141
Tdark
Novelty:  1.46022784
p_int:  0.992131809
p_ni:  0.007868191
Data Source:  BioPlex
LRP1
Tbio
Novelty:  0.00200788
p_int:  0.991421431
p_ni:  0.008578509
p_wrong:  6.1e-8
Data Source:  BioPlex
CBWD1
Tbio
Novelty:  0.04321511
p_int:  0.989863394
p_ni:  0.010136604
p_wrong:  2e-9
Score:  0.21
Data Source:  BioPlex,STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (2)
Find Similar Targets
Items per page:
10
1 – 2 of 2
GO Term
Evidence
Assigned by
Inferred from Electronic Annotation (IEA)
UniProtKB-SubCell
Inferred from Electronic Annotation (IEA)
UniProtKB-SubCell
Disease Associations (null)
No disease associations found
GWAS Traits (0)
No GWAS traits found
IDG Resources
No IDG generated resources found
Orthologs (5)
1 – 5 of 5
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
sterile alpha motif domain containing 1
VGNC:2256
100609030
Mouse
MGI:2142433
666704
Rat
RGD:7529921
102550189
Dog
sterile alpha motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17958]
Zebrafish
ZDB-GENE-090313-2
101884198
Species
Name
OMA
EggNOG
Inparanoid
Chimp
sterile alpha motif domain containing 1
Mouse
Rat
Dog
sterile alpha motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17958]
Zebrafish
Publication Statistics
PubMed Score 5.14
PubMed score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title