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Tclin
CA5B
Carbonic anhydrase 5B, mitochondrial

Protein Summary
Description
Reversible hydration of carbon dioxide. Carbonic anhydrases (CAs) are a large family of zinc metalloenzymes that catalyze the reversible hydration of carbon dioxide. They participate in a variety of biological processes, including respiration, calcification, acid-base balance, bone resorption, and the formation of aqueous humor, cerebrospinal fluid, saliva, and gastric acid. They show extensive diversity in tissue distribution and in their subcellular localization. This gene encodes carbonic anhydrase 5B. CA5B, and the related CA5A gene, has its expression localized in the mitochondria though CA5B has a wider tissue distribution than CA5A, which is restricted to the liver, kidneys, and skeletal muscle. A carbonic anhydrase pseudogene (CA5BP1) is adjacent to the CA5B gene and these two loci produce CA5BP1-CA5B readthrough transcripts. [provided by RefSeq, Jan 2019]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000318636
  • ENSP00000314099
  • ENSG00000169239
  • ENST00000454127
  • ENSP00000417021

Symbol
  • CAVB
  • CA-VB
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
gene perturbation
0.93
virus perturbation
0.85
histone modification site profile
0.82
microRNA
0.75
small molecule perturbation
0.75


Related Tools
GENEVA
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ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 52.67   (req: < 5)
Gene RIFs: 2   (req: <= 3)
Antibodies: 229   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 52.67   (req: >= 5)
Gene RIFs: 2   (req: > 3)
Antibodies: 229   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 4
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligands: 86
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drugs: 15
Orthologs (10)
1 – 5 of 10
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Macaque
carbonic anhydrase 5B
713128
Mouse
MGI:1926249
56078
Rat
RGD:1549783
302669
Dog
carbonic anhydrase 5B
VGNC:38613
100856271
Horse
carbonic anhydrase 5B, mitochondrial
100051095
Species
Name
OMA
EggNOG
Inparanoid
Macaque
carbonic anhydrase 5B
Mouse
Rat
Dog
carbonic anhydrase 5B
Horse
carbonic anhydrase 5B, mitochondrial
Protein Structure (0 Structures, 1 AlphaFold Model)
RepresentationColor Scheme
AF-Q9Y2D0-F1-model_v1

AlphaFold Structures Developed by DeepMind and EMBL-EBI

Pathways (4)
Metabolism (R-HSA-1430728)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 2 of 2
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Metabolism
Reactome
Reversible hydration of carbon dioxide
Name
Explore in Pharos
Explore in Source
Metabolism
Reversible hydration of carbon dioxide
Gene Ontology Terms (6)
Items per page:
10
1 – 2 of 2
GO Term
Evidence
Assigned by
Traceable Author Statement (TAS)
Reactome
Inferred from Electronic Annotation (IEA)
InterPro
Protein-Protein Interactions (35)
1 – 10 of 35
DBT
Tbio
Family: Enzyme
Novelty: 0.0070589
p_int: 0.859884806
p_ni: 0.140115193
p_wrong: 1e-9
Score: 0.297
Data Source: BioPlex,STRINGDB
CYP24A1
Tchem
Family: Enzyme
Novelty: 0.00107155
Score: 0.836
Data Source: STRINGDB
UHMK1
Tbio
Family: Kinase
Novelty: 0.04117277
Score: 0.7
Data Source: STRINGDB
THRSP
Tbio
Novelty: 0.00938864
Score: 0.676
Data Source: STRINGDB
BCLAF3
Tdark
Novelty: 1.67603845
Score: 0.66
Data Source: STRINGDB
SNRPB
Tbio
Novelty: 0.01503535
Score: 0.589
Data Source: STRINGDB
SLC4A4
Tbio
Family: Transporter
Novelty: 0.00352439
Score: 0.578
Data Source: STRINGDB
PM20D2
Tdark
Family: Enzyme
Novelty: 0.63491472
Score: 0.571
Data Source: STRINGDB
SLC9A1
Tchem
Family: Transporter
Novelty: 0.00096678
Score: 0.57
Data Source: STRINGDB
TAB3
Tbio
Family: Enzyme
Novelty: 0.01768638
Score: 0.56
Data Source: STRINGDB
Publication Statistics
PubMed Score  52.67

PubMed score by year
PubTator Score  33.62

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer