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Tbio
POLK
DNA polymerase kappa

Protein Summary
Description
DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity. This gene encodes a member of the DNA polymerase type-Y family of proteins. The encoded protein is a specialized DNA polymerase that catalyzes translesion DNA synthesis, which allows DNA replication in the presence of DNA lesions. Human cell lines lacking a functional copy of this gene exhibit impaired genome integrity and enhanced susceptibility to oxidative damage. Mutations in this gene that impair enzyme activity may be associated with prostate cancer in human patients. [provided by RefSeq, Sep 2016]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000241436
  • ENSP00000241436
  • ENSG00000122008
  • ENST00000504026
  • ENSP00000425075
  • ENST00000508526
  • ENSP00000426853
  • ENST00000509126
  • ENSP00000423532
  • ENST00000510815
  • ENSP00000422094
  • ENST00000515295
  • ENSP00000424174

Symbol
  • DINB1
  • DINP
  • POLQ
  • DINB1
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
protein domain
0.85
histone modification site profile
0.74
biological term
0.66
tissue sample
0.61
cell type or tissue
0.58


Related Tools
Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 64.49   (req: < 5)
Gene RIFs: 66   (req: <= 3)
Antibodies: 296   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 64.49   (req: >= 5)
Gene RIFs: 66   (req: > 3)
Antibodies: 296   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 13
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
GWAS Traits (2)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
total cholesterol measurement
2
2
2
77.9
low density lipoprotein cholesterol measurement
1
1
1
63.8
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
total cholesterol measurement
2
77.9
low density lipoprotein cholesterol measurement
1
63.8
Orthologs (14)
1 – 5 of 14
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
DNA polymerase kappa
VGNC:8631
461803
Macaque
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
Mouse
MGI:1349767
27015
Rat
RGD:620058
171525
Dog
DNA polymerase kappa
VGNC:44785
479180
Species
Name
OMA
EggNOG
Inparanoid
Chimp
DNA polymerase kappa
Macaque
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
Mouse
Rat
Dog
DNA polymerase kappa
Protein Structure (16 Structures, 1 AlphaFold Model)
RepresentationColor Scheme

Click on a row in the table to change the structure displayed.
More information can be found at RCSB PDB

AF-Q9UBT6-F1-model_v1

AlphaFold Structures Developed by DeepMind and EMBL-EBI

1 – 5 of 16
PDB Structure Id
Ligand
Method
Resolution (Å)
Residues
Fraction of Total Protein
Pub Year
Title
PDB Structure Id
Fraction of Total Protein
Resolution
Pub Year
Pathways (44)
DNA Damage Bypass (R-HSA-73893)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 5 of 16
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
DNA Damage Bypass
Reactome
DNA Double-Strand Break Repair
Reactome
DNA Repair
Reactome
Dual Incision in GG-NER
Reactome
Dual incision in TC-NER
Name
Explore in Pharos
Explore in Source
DNA Damage Bypass
DNA Double-Strand Break Repair
DNA Repair
Dual Incision in GG-NER
Dual incision in TC-NER
Gene Ontology Terms (16)
Items per page:
10
1 – 3 of 3
GO Term
Evidence
Assigned by
Inferred from Electronic Annotation (IEA)
InterPro
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Protein-Protein Interactions (165)
1 – 10 of 165
KCTD17
Tbio
Novelty: 0.12105733
p_int: 0.999999884
p_ni: 9.8e-8
p_wrong: 1.8e-8
Score: 0.169
Data Source: BioPlex,STRINGDB
SPART
Tbio
Novelty: 0.01524727
p_int: 0.99999967
p_ni: 3.3e-7
Score: 0.282
Data Source: BioPlex,STRINGDB
PARVG
Tbio
Novelty: 0.08921402
p_int: 0.999616656
p_ni: 0.000198971
p_wrong: 0.000184373
Score: 0.559
Data Source: BioPlex,STRINGDB
DTD1
Tbio
Family: Enzyme
Novelty: 0.11544469
p_int: 0.94028146
p_ni: 0.000606267
p_wrong: 0.059112273
Score: 0.54
Data Source: BioPlex,STRINGDB
REV1
Tbio
Novelty: 0.00294652
Score: 0.998
Data Source: Reactome,STRINGDB
REV3L
Tbio
Family: Enzyme
Novelty: 0.00411916
Score: 0.983
Data Source: Reactome,STRINGDB
PCNA
Tchem
Novelty: 0.03909539
Score: 0.976
Data Source: Reactome,STRINGDB
LIG1
Tchem
Family: Enzyme
Novelty: 0.00326816
Score: 0.973
Data Source: Reactome,STRINGDB
RAD51
Tchem
Novelty: 0.00011516
Score: 0.972
Data Source: STRINGDB
MAD2L2
Tbio
Novelty: 0.01091072
Score: 0.97
Data Source: Reactome,STRINGDB
Publication Statistics
PubMed Score  64.49

PubMed score by year
PubTator Score  166.92

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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