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Tbio
BAZ1A
Bromodomain adjacent to zinc finger domain protein 1A

Protein Summary
Description
Component of the ACF complex, an ATP-dependent chromatin remodeling complex, that regulates spacing of nucleosomes using ATP to generate evenly spaced nucleosomes along the chromatin. The ATPase activity of the complex is regulated by the length of flanking DNA. Also involved in facilitating the DNA replication process. BAZ1A is the accessory, non-catalytic subunit of the complex which can enhance and direct the process provided by the ATPase subunit, SMARCA5, probably through targeting pericentromeric heterochromatin in late S phase. Moves end-positioned nucleosomes to a predominantly central position. May have a role in nuclear receptor-mediated transcription repression. Component of the histone-fold protein complex CHRAC complex which facilitates nucleosome sliding by the ACF complex and enhances ACF-mediated chromatin assembly. The C-terminal regions of both CHRAC1 and POLE1 are required for these functions. The BAZ1A gene encodes the accessory subunit of the ATP-dependent chromati ...more
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000358716
  • ENSP00000351555
  • ENSG00000198604
  • ENST00000360310
  • ENSP00000353458
  • ENST00000382422
  • ENSP00000371859

Symbol
  • ACF1
  • WCRF180
  • ACF1
  • WALp1
  • hACF1
  • WCRF180
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
protein domain
1
interacting protein
0.98
virus perturbation
0.92
transcription factor perturbation
0.88
drug perturbation
0.87


Related Tools
Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 47.48   (req: < 5)
Gene RIFs: 13   (req: <= 3)
Antibodies: 116   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 47.48   (req: >= 5)
Gene RIFs: 13   (req: > 3)
Antibodies: 116   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 5
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
GWAS Traits (9)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
heel bone mineral density
1
4
4
95.9
reticulocyte count
7
3
7
78
mean corpuscular hemoglobin concentration
1
1
1
76.9
monocyte count
1
1
1
75.4
red blood cell density measurement
1
1
1
70.9
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
heel bone mineral density
4
95.9
reticulocyte count
7
78
mean corpuscular hemoglobin concentration
1
76.9
monocyte count
1
75.4
red blood cell density measurement
1
70.9
Orthologs (14)
1 – 5 of 14
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
bromodomain adjacent to zinc finger domain 1A
VGNC:3474
452855
Mouse
MGI:1309478
217578
Rat
RGD:1306199
314126
Dog
bromodomain adjacent to zinc finger domain 1A
VGNC:38389
480287
Horse
bromodomain adjacent to zinc finger domain 1A
VGNC:15773
100057597
Species
Name
OMA
EggNOG
Inparanoid
Chimp
bromodomain adjacent to zinc finger domain 1A
Mouse
Rat
Dog
bromodomain adjacent to zinc finger domain 1A
Horse
bromodomain adjacent to zinc finger domain 1A
Protein Structure (1 Structure, 1 AlphaFold Model)
RepresentationColor Scheme

Click on a row in the table to change the structure displayed.
More information can be found at RCSB PDB

AF-Q9NRL2-F1-model_v1

AlphaFold Structures Developed by DeepMind and EMBL-EBI

1 – 1 of 1
PDB Structure Id
Ligand
Method
Resolution (Å)
Residues
Fraction of Total Protein
Pub Year
Title
PDB Structure Id
Fraction of Total Protein
Resolution
Pub Year
Pathways (3)
Items per page:
1 – 3 of 3
Data Source
Name
Explore in Pharos
Explore in Source
WikiPathways
Ectoderm Differentiation
WikiPathways
Ectoderm Differentiation
WikiPathways
Prolactin Signaling Pathway
Name
Explore in Pharos
Explore in Source
Ectoderm Differentiation
Ectoderm Differentiation
Prolactin Signaling Pathway
Gene Ontology Terms (7)
Items per page:
10
1 – 1 of 1
GO Term
Evidence
Assigned by
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Protein-Protein Interactions (95)
1 – 10 of 95
POLE3
Tbio
Family: Enzyme
Novelty: 0.09657513
p_int: 0.999999809
p_ni: 1.91e-7
p_wrong: 1e-9
Score: 0.91
Data Source: BioPlex,STRINGDB
CAPN6
Tbio
Novelty: 0.04489237
p_int: 0.999976067
p_ni: 0.000023932
Score: 0.323
Data Source: BioPlex,STRINGDB
MECP2
Tchem
Family: TF
Novelty: 0.00051767
p_int: 0.989914107
p_ni: 0.009867762
p_wrong: 0.000218131
Score: 0.376
Data Source: BioPlex,STRINGDB
SMARCA5
Tbio
Novelty: 0.00518484
Score: 0.998
Data Source: STRINGDB
SMARCA1
Tbio
Novelty: 0.00452148
Score: 0.994
Data Source: STRINGDB
CHRAC1
Tbio
Novelty: 0.17492099
Score: 0.99
Data Source: STRINGDB
CDC5L
Tbio
Family: TF
Novelty: 0.00663599
Score: 0.985
Data Source: STRINGDB
RBBP4
Tbio
Novelty: 0.01062843
Score: 0.952
Data Source: STRINGDB
BPTF
Tchem
Family: Epigenetic
Novelty: 0.00826037
Score: 0.945
Data Source: STRINGDB
CECR2
Tchem
Family: Epigenetic
Novelty: 0.04949741
Score: 0.941
Data Source: STRINGDB
Publication Statistics
PubMed Score  47.48

PubMed score by year
PubTator Score  25.16

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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