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Tbio
BHLHE41
Class E basic helix-loop-helix protein 41

Protein Summary
Description
Transcriptional repressor involved in the regulation of the circadian rhythm by negatively regulating the activity of the clock genes and clock-controlled genes. Acts as the negative limb of a novel autoregulatory feedback loop (DEC loop) which differs from the one formed by the PER and CRY transcriptional repressors (PER/CRY loop). Both these loops are interlocked as it represses the expression of PER1 and in turn is repressed by PER1/2 and CRY1/2. Represses the activity of the circadian transcriptional activator: CLOCK-ARNTL/BMAL1 heterodimer by competing for the binding to E-box elements (5'-CACGTG-3') found within the promoters of its target genes. Negatively regulates its own expression and the expression of DBP and BHLHE41/DEC2. Acts as a corepressor of RXR and the RXR-LXR heterodimers and represses the ligand-induced RXRA/B/G, NR1H3/LXRA, NR1H4 and VDR transactivation activity. This gene encodes a basic helix-loop-helix protein expressed in various tissues. The encoded protein c ...more
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000242728
  • ENSP00000242728
  • ENSG00000123095

Symbol
  • BHLHB3
  • DEC2
  • SHARP1
  • DEC2
  • hDEC2
  • BHLHB3
  • SHARP1
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
molecular function
1
small molecule perturbation
0.8
transcription factor binding site profile
0.8
PubMedID
0.69
transcription factor
0.69


Related Tools
Target Illumination GWAS Analytics (TIGA)
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TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
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GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 116.89   (req: < 5)
Gene RIFs: 39   (req: <= 3)
Antibodies: 367   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 116.89   (req: >= 5)
Gene RIFs: 39   (req: > 3)
Antibodies: 367   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 28
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
GWAS Traits (11)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
BMI-adjusted waist-hip ratio
1
8
8
90.3
waist-hip ratio
1
8
8
89.4
BMI-adjusted hip circumference
1
6
6
78
hip circumference
1
5
5
75
2
2
0
1.1
64.8
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
BMI-adjusted waist-hip ratio
8
90.3
waist-hip ratio
8
89.4
BMI-adjusted hip circumference
6
78
hip circumference
5
75
0
1.1
64.8
Orthologs (9)
1 – 5 of 9
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
basic helix-loop-helix family member e41
VGNC:4948
465351
Mouse
MGI:1930704
79362
Rat
RGD:70900
117095
Cow
basic helix-loop-helix family member e41
VGNC:26487
613907
Pig
basic helix-loop-helix family member e41
100626912
Species
Name
OMA
EggNOG
Inparanoid
Chimp
basic helix-loop-helix family member e41
Mouse
Rat
Cow
basic helix-loop-helix family member e41
Pig
basic helix-loop-helix family member e41
Protein Structure (0 Structures, 1 AlphaFold Model)
RepresentationColor Scheme
AF-Q9C0J9-F1-model_v1

AlphaFold Structures Developed by DeepMind and EMBL-EBI

Pathways (89)
BMAL1:CLOCK,NPAS2 activates circadian gene expression (R-HSA-1368108)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 2 of 2
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
BMAL1:CLOCK,NPAS2 activates circadian gene expression
Reactome
Circadian Clock
Name
Explore in Pharos
Explore in Source
BMAL1:CLOCK,NPAS2 activates circadian gene expression
Circadian Clock
Gene Ontology Terms (29)
Items per page:
10
1 – 10 of 17
GO Term
Evidence
Assigned by
Inferred from Direct Assay (IDA)
BHF-UCL
Inferred from Direct Assay (IDA)
UniProtKB
Inferred from Physical Interaction (IPI)
BHF-UCL
Inferred from Physical Interaction (IPI)
BHF-UCL
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Sequence or structural Similarity (ISS)
BHF-UCL
Protein-Protein Interactions (64)
1 – 10 of 64
PER2
Tchem
Novelty:  0.00165834
Score:  0.999
Data Source:  STRINGDB
CLOCK
Tbio
Family:  TF; Epigenetic
Novelty:  0.00159625
Score:  0.994
Data Source:  STRINGDB
NPAS2
Tbio
Family:  TF
Novelty:  0.00728451
Score:  0.993
Data Source:  STRINGDB
CRY2
Tbio
Novelty:  0.00156961
Score:  0.991
Data Source:  STRINGDB
NFIL3
Tbio
Family:  TF
Novelty:  0.00882074
Score:  0.987
Data Source:  Reactome,STRINGDB
NR1D1
Tchem
Family:  NR
Novelty:  0.00250799
Score:  0.981
Data Source:  STRINGDB
ARNTL
Tbio
Family:  TF
Novelty:  0.00102829
Score:  0.977
Data Source:  STRINGDB
CRY1
Tchem
Novelty:  0.00116593
Score:  0.973
Data Source:  STRINGDB
CSNK1E
Tclin
Family:  Kinase
Novelty:  0.00891859
Score:  0.944
Data Source:  STRINGDB
BHLHE40
Tbio
Family:  TF
Novelty:  0.01175662
Score:  0.922
Data Source:  STRINGDB
Publication Statistics
PubMed Score  116.89

PubMed score by year
PubTator Score  88.4

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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