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Tdark
YIPF6
Protein YIPF6

Protein Summary
Description
May be required for stable YIPF1 and YIPF2 protein expression.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000374622
  • ENSP00000363751
  • ENSG00000181704
  • ENST00000462683
  • ENSP00000417573

Symbol
  • FinGER6
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
virus perturbation
0.97
transcription factor perturbation
0.91
histone modification site profile
0.87
kinase perturbation
0.76
microRNA
0.67


Related Tools
GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 18.58   (req: < 5)
Gene RIFs: 2   (req: <= 3)
Antibodies: 50   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 18.58   (req: >= 5)
Gene RIFs: 2   (req: > 3)
Antibodies: 50   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 2
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Orthologs (13)
1 – 5 of 13
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Macaque
Yip1 domain family member 6
713477
Mouse
MGI:1925179
77929
Rat
RGD:1566154
363476
Dog
Yip1 domain family member 6
VGNC:48492
491931
Horse
Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
Species
Name
OMA
EggNOG
Inparanoid
Macaque
Yip1 domain family member 6
Mouse
Rat
Dog
Yip1 domain family member 6
Horse
Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
Pathways (4)
Golgi Associated Vesicle Biogenesis (R-HSA-432722)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 4 of 4
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Golgi Associated Vesicle Biogenesis
Reactome
Membrane Trafficking
Reactome
Vesicle-mediated transport
Reactome
trans-Golgi Network Vesicle Budding
Name
Explore in Pharos
Explore in Source
Golgi Associated Vesicle Biogenesis
Membrane Trafficking
Vesicle-mediated transport
trans-Golgi Network Vesicle Budding
Gene Ontology Terms (10)
Items per page:
10
1 – 1 of 1
GO Term
Evidence
Assigned by
Inferred from Electronic Annotation (IEA)
Ensembl
Protein-Protein Interactions (116)
1 – 10 of 116
YIPF1
Tbio
Novelty: 0.00507381
p_int: 0.9851726
p_ni: 0.014534758
p_wrong: 0.000292643
Score: 0.964
Data Source: BioPlex,STRINGDB
SLC7A1
Tbio
Family: Transporter
Novelty: 0.00197313
p_int: 0.901820272
p_ni: 0.098179684
p_wrong: 4.4e-8
Data Source: BioPlex
SLC7A14
Tbio
Family: Transporter
Novelty: 0.1613451
p_int: 0.867089035
p_ni: 0.128998332
p_wrong: 0.003912633
Data Source: BioPlex
ADGRE5
Tbio
Family: GPCR
Novelty: 0.01137558
p_int: 0.816704618
p_ni: 0.183295024
p_wrong: 3.59e-7
Score: 0.181
Data Source: BioPlex,STRINGDB
SPPL2B
Tbio
Family: Enzyme
Novelty: 0.0274774
p_int: 0.803968276
p_ni: 0.196031384
p_wrong: 3.41e-7
Score: 0.156
Data Source: BioPlex,STRINGDB
YIPF2
Tdark
Novelty: 0.01302483
Score: 0.973
Data Source: STRINGDB
AP4E1
Tdark
Novelty: 0.09773225
Score: 0.941
Data Source: STRINGDB
YIPF3
Tbio
Novelty: 0.12021667
Score: 0.933
Data Source: STRINGDB
OCRL
Tbio
Family: Enzyme
Novelty: 0.00555539
Score: 0.931
Data Source: STRINGDB
TBC1D8B
Tdark
Novelty: 0.35419125
Score: 0.925
Data Source: STRINGDB
Publication Statistics
PubMed Score  18.58

PubMed score by year
PubTator Score  6.2

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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