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Tbio
NDUFAF7
Protein arginine methyltransferase NDUFAF7, mitochondrial

Protein Summary
Description
Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) (PubMed:20406883, PubMed:24089531, PubMed:24838397). Acts by mediating symmetric dimethylation of 'Arg-118' of NDUFS2 after it assembles into the complex I, stabilizing the early intermediate complex (PubMed:24089531). This gene encodes an assembly factor protein which helps in the assembly and stabilization of Complex I, a large multi-subunit enzyme in the mitochondrial respiratory chain. Complex I is involved in several physiological activities in the cell, including metabolite transport and ATP synthesis. The encoded protein is a methyltransferase which methylates Arg85 of a subunit of Complex I in the early stages of its assembly. A pseudogene related to this gene is located on chromosome 8. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000002125
  • ENSP00000002125
  • ENSG00000003509
  • ENST00000336237
  • ENSP00000337431

Symbol
  • C2orf56
  • MidA
  • C2orf56
  • PRO1853
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
histone modification site profile
0.89
virus perturbation
0.76
tissue
0.68
transcription factor binding site profile
0.68
transcription factor perturbation
0.68


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.19   (req: < 5)
Gene RIFs: 5   (req: <= 3)
Antibodies: 107   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.19   (req: >= 5)
Gene RIFs: 5   (req: > 3)
Antibodies: 107   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 5
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
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TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (121)
USP48
Tbio
Family:  Enzyme
Novelty:  0.10103618
p_int:  0.999733195
p_ni:  0.000266805
Score:  0.185
Data Source:  BioPlex,STRINGDB
ALX3
Tbio
Family:  TF
Novelty:  0.02711914
p_int:  0.999648082
p_ni:  0.000351918
Data Source:  BioPlex
GLB1L3
Tdark
Family:  Enzyme
Novelty:  1.00833616
p_int:  0.999593732
p_ni:  0.000406268
Data Source:  BioPlex
PRAMEF17
Tdark
Novelty:  3.36925974
p_int:  0.999486665
p_ni:  0.000513335
Score:  0.173
Data Source:  BioPlex,STRINGDB
NPPA
Tchem
Novelty:  0.00046693
p_int:  0.999305582
p_ni:  0.000694418
Data Source:  BioPlex
MRPS18B
Tbio
Novelty:  0.14519418
p_int:  0.998844508
p_ni:  0.001155492
Score:  0.197
Data Source:  BioPlex,STRINGDB
TRIM44
Tbio
Novelty:  0.00483553
p_int:  0.998826215
p_ni:  0.00117378
p_wrong:  5e-9
Data Source:  BioPlex
OXLD1
Tdark
Family:  Enzyme
Novelty:  23
p_int:  0.998143402
p_ni:  0.001856596
p_wrong:  2e-9
Data Source:  BioPlex
DMAP1
Tbio
Family:  Enzyme
Novelty:  0.03152166
p_int:  0.997319671
p_ni:  0.002680325
p_wrong:  4e-9
Data Source:  BioPlex
ZNF517
Tdark
Family:  TF
Novelty:  1.60617003
p_int:  0.997209221
p_ni:  0.002790696
p_wrong:  8.2e-8
Data Source:  BioPlex
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (28)
Complex I biogenesis (R-HSA-6799198)

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Find Similar Targets
Items per page:
1 – 5 of 5
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Complex I biogenesis
Reactome
Metabolism
Reactome
Respiratory electron transport
Reactome
Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
Reactome
The citric acid (TCA) cycle and respiratory electron transport
Name
Explore in Pharos
Explore in Source
Complex I biogenesis
Metabolism
Respiratory electron transport
Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.
The citric acid (TCA) cycle and respiratory electron transport
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (14)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
blood protein measurement
1
1
1
71.3
body mass index
3
2
4
68.1
schizophrenia
2
2
0
1.1
65.1
neutrophil count
1
1
1
47.2
lymphocyte percentage of leukocytes
1
1
1
44
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
blood protein measurement
1
71.3
body mass index
4
68.1
schizophrenia
0
1.1
65.1
neutrophil count
1
47.2
lymphocyte percentage of leukocytes
1
44
Find similar targets by:
IDG Resources
No IDG generated resources found
Orthologs (15)
1 – 5 of 15
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
NADH:ubiquinone oxidoreductase complex assembly factor 7
VGNC:6401
459157
Macaque
NADH:ubiquinone oxidoreductase complex assembly factor 7
709473
Mouse
MGI:1920944
73694
Rat
RGD:1311578
298748
Dog
NADH:ubiquinone oxidoreductase complex assembly factor 7
VGNC:43697
475725
Species
Name
OMA
EggNOG
Inparanoid
Chimp
NADH:ubiquinone oxidoreductase complex assembly factor 7
Macaque
NADH:ubiquinone oxidoreductase complex assembly factor 7
Mouse
Rat
Dog
NADH:ubiquinone oxidoreductase complex assembly factor 7
Publication Statistics
PubMed Score 6.19
PubMed score by year
PubTator Score 57.83
PubTator score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title