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Tdark
RTL5
Retrotransposon Gag-like protein 5

Protein Summary
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000479991
  • ENSP00000418667
  • ENSG00000242732
  • ENST00000609883
  • ENSP00000476792

Symbol
  • KIAA2001
  • RGAG4
  • MAR5
  • MART5
  • RGAG4
  • SIRH8
  • 6430402L03Rik
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
biological process
0
biological term
0
cell line
0
cell type or tissue
0
cellular component
0


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 11.38   (req: < 5)
Gene RIFs: 1   (req: <= 3)
Antibodies: 36   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 11.38   (req: >= 5)
Gene RIFs: 1   (req: > 3)
Antibodies: 36   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
No expression data found
Related Tools
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (17)
O15255
Tdark
Novelty:  0.20316911
Score:  0.737
Data Source:  STRINGDB
A6ZKI3
Tbio
Novelty:  0.20316911
Score:  0.737
Data Source:  STRINGDB
PNMA8A
Tdark
Novelty:  0.95674878
Score:  0.73
Data Source:  STRINGDB
RTL8A
Tdark
Novelty:  1.2458167
Score:  0.641
Data Source:  STRINGDB
ZCCHC12
Tbio
Novelty:  0.16283891
Score:  0.594
Data Source:  STRINGDB
ACCS
Tbio
Family:  Enzyme
Novelty:  0.02417166
Score:  0.567
Data Source:  STRINGDB
PNMA5
Tdark
Novelty:  0.38868015
Score:  0.553
Data Source:  STRINGDB
SAV1
Tbio
Novelty:  0.00962335
Score:  0.548
Data Source:  STRINGDB
MARS2
Tbio
Family:  Enzyme
Novelty:  0.02533315
Score:  0.548
Data Source:  STRINGDB
GTF2B
Tbio
Novelty:  0.00179492
Score:  0.537
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (0)
No GO Terms found
Disease Associations ()
No disease associations found
GWAS Traits (3)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
testosterone measurement
2
2
2
54.3
platelet crit
1
1
1
35
platelet count
1
1
1
30.2
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
testosterone measurement
2
54.3
platelet crit
1
35
platelet count
1
30.2
IDG Resources
No IDG generated resources found
Orthologs (6)
1 – 5 of 6
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
retrotransposon Gag like 5
VGNC:13571
101058254
Mouse
MGI:3045324
331474
Dog
retrotransposon Gag like 5
VGNC:45793
102155009
Horse
retrotransposon Gag like 5
VGNC:22615
102147797
Cow
retrotransposon Gag like 5
VGNC:34200
100851574
Species
Name
OMA
EggNOG
Inparanoid
Chimp
retrotransposon Gag like 5
Mouse
Dog
retrotransposon Gag like 5
Horse
retrotransposon Gag like 5
Cow
retrotransposon Gag like 5
Publication Statistics
PubMed Score 11.38
PubMed score by year
PubTator Score 5.37
PubTator score by year
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Related Publications
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PMID
Year
Title