COL28A1
Collagen alpha-1(XXVIII) chain
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Most Knowledge About | Knowledge Value
(0 to 1 scale) | ||
---|---|---|---|
cellular component | 0.7 | ||
tissue | 0.62 | ||
protein domain | 0.58 | ||
phenotype | 0.57 | ||
cell line | 0.56 | ||
These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
- OR - satisfy the following criterion:
Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions
Target has at least one approved drug - AND - satisfies the preceding conditions
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Data Source | Name | Explore in Pharos | Explore in Source | ||
---|---|---|---|---|---|
Reactome | Collagen biosynthesis and modifying enzymes | ||||
Reactome | Collagen chain trimerization | ||||
Reactome | Collagen formation | ||||
Reactome | Extracellular matrix organization | ||||
Name | Explore in Pharos | Explore in Source | ||
---|---|---|---|---|
Collagen biosynthesis and modifying enzymes | ||||
Collagen chain trimerization | ||||
Collagen formation | ||||
Extracellular matrix organization | ||||
GO Term | Evidence | Assigned by | ||
---|---|---|---|---|
Inferred from High Throughput Direct Assay (HDA) | BHF-UCL | |||
Inferred from Biological aspect of Ancestor (IBA) | GO_Central | |||
Inferred from Electronic Annotation (IEA) | UniProtKB-KW | |||
GWAS Trait | EFO ID | Study Count | SNP Count | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
---|---|---|---|---|---|---|---|---|---|
diastolic blood pressure | 1 | 1 | 1 | 12.9 | |||||
GWAS Trait | EFO ID | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
---|---|---|---|---|---|---|---|
diastolic blood pressure | 1 | 12.9 | |||||
Species | Name | Source ID | Gene ID | OMA | EggNOG | Inparanoid | ||
---|---|---|---|---|---|---|---|---|
Mouse | MGI:2685312 | 213945 | ||||||
Dog | collagen type XXVIII alpha 1 chain | VGNC:39470 | 482315 | |||||
Horse | collagen type XXVIII alpha 1 chain | VGNC:16736 | 100063901 | |||||
Anole lizard | collagen type XXVIII alpha 1 chain | 100562364 | ||||||
Xenopus | collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442] | |||||||
Species | Name | OMA | EggNOG | Inparanoid | ||
---|---|---|---|---|---|---|
Mouse | ||||||
Dog | collagen type XXVIII alpha 1 chain | |||||
Horse | collagen type XXVIII alpha 1 chain | |||||
Anole lizard | collagen type XXVIII alpha 1 chain | |||||
Xenopus | collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442] | |||||
PMID | Year | Title |
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