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Tbio
GOLGB1
Golgin subfamily B member 1

Protein Summary
Description
May participate in forming intercisternal cross-bridges of the Golgi complex.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000340645
  • ENSP00000341848
  • ENSG00000173230
  • ENST00000393667
  • ENSP00000377275
  • ENST00000614479
  • ENSP00000484083

Symbol
  • GCP
  • GCP372
  • GOLIM1
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
disease perturbation
0.97
interacting protein
0.78
histone modification site profile
0.77
cell line
0.73
drug perturbation
0.71


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 93.04   (req: < 5)
Gene RIFs: 9   (req: <= 3)
Antibodies: 127   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 93.04   (req: >= 5)
Gene RIFs: 9   (req: > 3)
Antibodies: 127   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 6
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
No expression data found
Related Tools
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (177)
TMED2
Tbio
Novelty:  0.03731104
p_int:  0.999989163
p_ni:  0.000010837
Score:  0.924
Data Source:  BioPlex,STRINGDB
SCGN
Tbio
Novelty:  0.01434518
p_int:  0.999674669
p_ni:  0.000325331
Score:  0.19
Data Source:  BioPlex,STRINGDB
TMED10
Tbio
Novelty:  0.02742083
p_int:  0.99966241
p_ni:  0.00033759
Score:  0.925
Data Source:  BioPlex,STRINGDB
TEX35
Tdark
Novelty:  0.5605055
p_int:  0.996433442
p_ni:  0.003566558
Data Source:  BioPlex
PIK3IP1
Tbio
Family:  Enzyme
Novelty:  0.07364653
p_int:  0.888535064
p_ni:  0.111464936
Data Source:  BioPlex
IPPK
Tbio
Family:  Enzyme
Novelty:  0.02169701
p_int:  0.875927978
p_ni:  0.124072022
Data Source:  BioPlex
USO1
Tbio
Novelty:  0.02066669
Score:  0.994
Data Source:  STRINGDB
GOLGA2
Tbio
Novelty:  0.00544771
Score:  0.994
Data Source:  STRINGDB
GOSR1
Tbio
Novelty:  0.03139481
Score:  0.988
Data Source:  STRINGDB
STX5
Tbio
Novelty:  0.00964918
Score:  0.987
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (10)
Asparagine N-linked glycosylation (R-HSA-446203)

Click on a row in the table to change the structure displayed.

Find Similar Targets
Items per page:
1 – 5 of 10
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Asparagine N-linked glycosylation
Reactome
COPI-mediated anterograde transport
Reactome
ER to Golgi Anterograde Transport
Reactome
Golgi Associated Vesicle Biogenesis
Reactome
Membrane Trafficking
Name
Explore in Pharos
Explore in Source
Asparagine N-linked glycosylation
COPI-mediated anterograde transport
ER to Golgi Anterograde Transport
Golgi Associated Vesicle Biogenesis
Membrane Trafficking
Viral Interactions (0)
No viral interactions found
Disease Associations ()
No disease associations found
GWAS Traits (7)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
calcium measurement
1
9
9
97.9
2
2
0
1.1
86.2
mean platelet volume
2
2
2
83
mean reticulocyte volume
1
1
1
53.3
mean corpuscular hemoglobin concentration
1
1
1
45.2
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
calcium measurement
9
97.9
0
1.1
86.2
mean platelet volume
2
83
mean reticulocyte volume
1
53.3
mean corpuscular hemoglobin concentration
1
45.2
Find similar targets by:
IDG Resources
No IDG generated resources found
Orthologs (11)
1 – 5 of 11
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
golgin B1
VGNC:1829
460624
Macaque
golgin B1
713993
Mouse
MGI:1099447
224139
Rat
RGD:708429
192243
Dog
golgin B1
VGNC:41343
478581
Species
Name
OMA
EggNOG
Inparanoid
Chimp
golgin B1
Macaque
golgin B1
Mouse
Rat
Dog
golgin B1
Publication Statistics
PubMed Score 93.04
PubMed score by year
PubTator Score 211.39
PubTator score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title