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Tbio
SMAGP
Small cell adhesion glycoprotein

Protein Summary
Description
May play a role in epithelial cell-cell contacts. May play a role in tumor invasiveness and metastasis formation.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000398453
  • ENSP00000381471
  • ENSG00000170545
  • ENST00000603798
  • ENSP00000475068
  • ENST00000603864
  • ENSP00000474892

Symbol
  • hSMAGP
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
histone modification site profile
0.88
disease perturbation
0.83
tissue sample
0.73
cell type or tissue
0.66
gene perturbation
0.61


IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.34   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 99   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 6.34   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 99   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Protein-Protein Interactions (32)
1 – 10 of 32
TSNAXIP1
Tdark
Novelty:  0.50007311
Score:  0.621
Data Source:  STRINGDB
C6orf141
Tdark
Novelty:  1.46022784
Score:  0.567
Data Source:  STRINGDB
MITD1
Tbio
Novelty:  0.30899265
Score:  0.565
Data Source:  STRINGDB
PDCL3
Tbio
Novelty:  0.05786581
Score:  0.546
Data Source:  STRINGDB
SYNE3
Tbio
Novelty:  0.06515065
Score:  0.522
Data Source:  STRINGDB
CNNM1
Tdark
Novelty:  0.11053515
Score:  0.502
Data Source:  STRINGDB
COLGALT2
Tbio
Family:  Enzyme
Novelty:  0.15981994
Score:  0.502
Data Source:  STRINGDB
CEACAM20
Tdark
Novelty:  0.43514672
Score:  0.499
Data Source:  STRINGDB
CMTM4
Tbio
Novelty:  0.09490151
Score:  0.496
Data Source:  STRINGDB
COL26A1
Tbio
Novelty:  0.07322658
Score:  0.483
Data Source:  STRINGDB
GWAS Traits (8)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
mean platelet volume
3
4
4
97.8
basophil count
2
2
2
83.5
platelet count
2
2
2
76.1
mean corpuscular hemoglobin concentration
1
1
1
51.4
basophil percentage of leukocytes
1
1
1
38
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
mean platelet volume
4
97.8
basophil count
2
83.5
platelet count
2
76.1
mean corpuscular hemoglobin concentration
1
51.4
basophil percentage of leukocytes
1
38
Find similar targets by:
Orthologs (7)
1 – 5 of 7
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Mouse
MGI:2448476
207818
Rat
RGD:727777
300236
Dog
small cell adhesion glycoprotein
VGNC:46526
100684687
Horse
small cell adhesion glycoprotein [Source:HGNC Symbol;Acc:HGNC:26918]
Cow
small cell adhesion glycoprotein
VGNC:34982
787004
Species
Name
OMA
EggNOG
Inparanoid
Mouse
Rat
Dog
small cell adhesion glycoprotein
Horse
small cell adhesion glycoprotein [Source:HGNC Symbol;Acc:HGNC:26918]
Cow
small cell adhesion glycoprotein
Publication Statistics
PubMed Score 6.34
PubMed score by year
PubTator Score 1.70
PubTator score by year