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Tbio
PATE1
Prostate and testis expressed protein 1

Protein Summary
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000305738
  • ENSP00000307164
  • ENSG00000171053
  • ENST00000437148
  • ENSP00000396056

Symbol
  • PATE
  • PATE
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
cell type or tissue
0.85
tissue
0.53
microRNA
0.49
disease
0.46
kinase perturbation
0.42


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 16   (req: < 5)
Gene RIFs: 4   (req: <= 3)
Antibodies: 57   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 16   (req: >= 5)
Gene RIFs: 4   (req: > 3)
Antibodies: 57   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 1
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (71)
PCYOX1L
Tdark
Family:  Enzyme
Novelty:  1.25398886
p_int:  0.999949829
p_ni:  0.000050159
p_wrong:  1.2e-8
Score:  0.177
Data Source:  BioPlex,STRINGDB
PDIA5
Tbio
Family:  Enzyme
Novelty:  0.06234465
p_int:  0.999756479
p_ni:  0.000243521
Data Source:  BioPlex
SUSD1
Tdark
Novelty:  0.54249826
p_int:  0.999548226
p_ni:  0.000451645
p_wrong:  1.29e-7
Data Source:  BioPlex
CACNA2D1
Tclin
Family:  IC
Novelty:  0.01744541
p_int:  0.999468794
p_ni:  0.000531206
Data Source:  BioPlex
CTSF
Tchem
Family:  Enzyme
Novelty:  0.01359417
p_int:  0.999309315
p_ni:  0.000690684
p_wrong:  1e-9
Data Source:  BioPlex
SMOC1
Tbio
Novelty:  0.03819681
p_int:  0.998727128
p_ni:  0.001272515
p_wrong:  3.57e-7
Data Source:  BioPlex
TMEM67
Tbio
Novelty:  0.02573267
p_int:  0.998259325
p_ni:  0.001740675
Data Source:  BioPlex
BIRC6
Tbio
Novelty:  0.01187953
p_int:  0.997932835
p_ni:  0.002067165
Data Source:  BioPlex
CACNA2D2
Tclin
Family:  IC
Novelty:  0.02041017
p_int:  0.997808911
p_ni:  0.002191089
Data Source:  BioPlex
PLXNA2
Tbio
Novelty:  0.01765957
p_int:  0.997239272
p_ni:  0.002760728
Data Source:  BioPlex
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Disease Associations (null)
No disease associations found
GWAS Traits (3)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
mean platelet volume
1
1
1
12.9
platelet count
1
1
1
11.6
mean corpuscular hemoglobin concentration
1
1
1
11.5
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
mean platelet volume
1
12.9
platelet count
1
11.6
mean corpuscular hemoglobin concentration
1
11.5
IDG Resources
No IDG generated resources found
Orthologs (5)
1 – 5 of 5
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
prostate and testis expressed 1
VGNC:3241
740016
Macaque
prostate and testis expressed 1
713491
Mouse
MGI:4936886
100312987
Rat
RGD:2319716
100361657
Horse
prostate and testis expressed 1
VGNC:21172
100630553
Species
Name
OMA
EggNOG
Inparanoid
Chimp
prostate and testis expressed 1
Macaque
prostate and testis expressed 1
Mouse
Rat
Horse
prostate and testis expressed 1
Publication Statistics
PubMed Score 16.00
PubMed score by year
PubTator Score 12.83
PubTator score by year
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Related Publications
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PMID
Year
Title