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Tbio
RPL38
60S ribosomal protein L38

Protein Summary
Description
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L38E family of ribosomal proteins. It is located in the cytoplasm. Alternative splice variants have been identified, both encoding the same protein. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome, including one located in the promoter region of the type 1 angiotensin II receptor gene. [provided by RefSeq, Jul 2008]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000311111
  • ENSP00000309830
  • ENSG00000172809
  • ENST00000439590
  • ENSP00000390279
  • ENST00000533498
  • ENSP00000434243

Symbol
  • L38
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
interacting protein
1
kinase perturbation
1
phenotype
1
transcription factor binding site profile
0.97
disease perturbation
0.95


IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 31.55   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 87   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 31.55   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 87   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 14
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
No expression data found
Related Tools
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (413)
MRPL34
Tdark
Novelty:  1.17388411
p_int:  0.985284403
p_ni:  0.014715597
Score:  0.33
Data Source:  BioPlex,STRINGDB
RPS6
Tbio
Novelty:  0.00122241
Score:  0.999
Data Source:  STRINGDB
RPL7
Tbio
Novelty:  0.00552644
Score:  0.999
Data Source:  STRINGDB
RPL13A
Tbio
Novelty:  0.00503698
Score:  0.999
Data Source:  STRINGDB
RPS15
Tbio
Novelty:  0.00635155
Score:  0.999
Data Source:  STRINGDB
RPL23A
Tbio
Novelty:  0.02951947
Score:  0.999
Data Source:  STRINGDB
RPL10A
Tbio
Novelty:  0.01747453
Score:  0.999
Data Source:  STRINGDB
RPL31
Tbio
Novelty:  0.03427872
Score:  0.999
Data Source:  STRINGDB
RPL3
Tbio
Novelty:  0.00566964
Score:  0.999
Data Source:  STRINGDB
RPS18
Tbio
Novelty:  0.00688684
Score:  0.999
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (35)
Axon guidance (R-HSA-422475)

Click on a row in the table to change the structure displayed.

Find Similar Targets
Items per page:
1 – 5 of 32
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Axon guidance
Reactome
Cap-dependent Translation Initiation
Reactome
Developmental Biology
Reactome
Disease
Reactome
Eukaryotic Translation Elongation
Name
Explore in Pharos
Explore in Source
Axon guidance
Cap-dependent Translation Initiation
Developmental Biology
Disease
Eukaryotic Translation Elongation
Viral Interactions (0)
No viral interactions found
Disease Associations ()
No disease associations found
GWAS Traits (0)
No GWAS traits found
Find similar targets by:
IDG Resources
No IDG generated resources found
Orthologs (14)
1 – 5 of 14
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
ribosomal protein L38
VGNC:9576
745405
Macaque
60S ribosomal protein L38 pseudogene
710665
Mouse
MGI:1914921
67671
Horse
ribosomal protein L38
100630893
Cow
ribosomal protein L38
615300
Species
Name
OMA
EggNOG
Inparanoid
Chimp
ribosomal protein L38
Macaque
60S ribosomal protein L38 pseudogene
Mouse
Horse
ribosomal protein L38
Cow
ribosomal protein L38
Publication Statistics
PubMed Score 31.55
PubMed score by year
PubTator Score 17.47
PubTator score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title