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Tbio
RANBP2
E3 SUMO-protein ligase RanBP2

Protein Summary
Description
E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I (PubMed:11792325, PubMed:12032081, PubMed:15378033, PubMed:22194619, PubMed:15931224). Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates (PubMed:7775481). Binds single-stranded RNA (in vitro) (PubMed:7775481). May bind DNA (PubMed:7775481). Component of the nuclear export pathway (PubMed:10078529). Specific docking site for the nuclear export factor exportin-1 (PubMed:10078529). Sumoylates PML at 'Lys-490' which is essential for the proper assembly of PML-NB (PubMed:22155184). Recruits BICD2 to the nuclear envelope and cytoplasmic stacks of nuclear pore complex known as annulate lamellae during G2 phase of cell cycle (PubMed:20386726). Probable inactive PPIase with no peptidyl-prolyl cis-trans isomerase activity (PubMed:20676357, PubMed:23353830). RAN is a small GTP-binding protein of the RAS superfamily ...more
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000283195
  • ENSP00000283195
  • ENSG00000153201

Symbol
  • NUP358
  • ANE1
  • TRP1
  • TRP2
  • ADANE
  • IIAE3
  • NUP358
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
protein domain
1
drug perturbation
0.99
hub protein
0.96
protein complex
0.94
transcription factor binding site profile
0.93


IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 209.45   (req: < 5)
Gene RIFs: 64   (req: <= 3)
Antibodies: 187   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 209.45   (req: >= 5)
Gene RIFs: 64   (req: > 3)
Antibodies: 187   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 16
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Data Bank (13)
1 – 5 of 13
PDB Structure Id
Ligand
Method
Resolution (Å)
M.W. (kDa)
Pub Year
Title
PDB Structure Id
M.W.
Resolution
Pub Year
Pathways (86)
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal (R-HSA-141444)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 5 of 81
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Reactome
Amplification of signal from the kinetochores
Reactome
Antiviral mechanism by IFN-stimulated genes
Reactome
Cell Cycle
Reactome
Cell Cycle Checkpoints
Name
Explore in Pharos
Explore in Source
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Amplification of signal from the kinetochores
Antiviral mechanism by IFN-stimulated genes
Cell Cycle
Cell Cycle Checkpoints
Gene Ontology Terms (30)
Items per page:
10
1 – 5 of 5
GO Term
Evidence
Assigned by
Inferred from Experiment (EXP)
Reactome
Inferred from Physical Interaction (IPI)
GO_Central
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Inferred from Electronic Annotation (IEA)
Ensembl
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Protein-Protein Interactions (444)
1 – 10 of 444
B2M
Tbio
Novelty: 0.00011248
p_int: 0.999805914
p_ni: 0.000194086
Score: 0.815
Data Source: BioPlex,STRINGDB
RAN
Tbio
Family: Enzyme
Novelty: 0.00160888
p_int: 0.999479057
p_ni: 0.000520943
Score: 0.999
Data Source: BioPlex,STRINGDB
RCC1
Tbio
Novelty: 0.00260884
p_int: 0.99787342
p_ni: 0.00212658
Score: 0.957
Data Source: BioPlex,STRINGDB
NEMP1
Tdark
Novelty: 0.37603456
p_int: 0.996694651
p_ni: 0.003305349
Score: 0.858
Data Source: BioPlex,STRINGDB
UBE2I
Tbio
Novelty: 0.00267883
p_int: 0.979696179
p_ni: 0.020303821
Score: 0.999
Data Source: BioPlex,Reactome,STRINGDB
PIP
Tbio
Novelty: 0.00208509
p_int: 0.949889529
p_ni: 0.050110471
Data Source: BioPlex
NUSAP1
Tbio
Novelty: 0.01702118
p_int: 0.825481177
p_ni: 0.174518823
Score: 0.857
Data Source: BioPlex,STRINGDB
TRAF3IP3
Tbio
Novelty: 0.12180834
p_int: 0.800593605
p_ni: 0.199406395
Score: 0.158
Data Source: BioPlex,STRINGDB
SUMO1
Tbio
Novelty: 0.00137629
Score: 0.999
Data Source: Reactome,STRINGDB
RANGAP1
Tbio
Family: Enzyme
Novelty: 0.00917672
Score: 0.999
Data Source: Reactome,STRINGDB
Publication Statistics
PubMed Score  209.45

PubMed score by year
PubTator Score  153.02

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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