COL5A1
Collagen alpha-1(V) chain
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Most Knowledge About | Knowledge Value
(0 to 1 scale) | ||
---|---|---|---|
transcription factor perturbation | 0.96 | ||
PubMedID | 0.91 | ||
small molecule perturbation | 0.8 | ||
molecular function | 0.76 | ||
disease perturbation | 0.74 | ||
These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
- OR - satisfy the following criterion:
Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions
Target has at least one approved drug - AND - satisfies the preceding conditions
Click on a row in the table to change the structure displayed.
Data Source | Name | Explore in Pharos | Explore in Source | ||
---|---|---|---|---|---|
Reactome | Assembly of collagen fibrils and other multimeric structures | ||||
Reactome | Collagen biosynthesis and modifying enzymes | ||||
Reactome | Collagen chain trimerization | ||||
Reactome | Collagen formation | ||||
Reactome | Extracellular matrix organization | ||||
Name | Explore in Pharos | Explore in Source | ||
---|---|---|---|---|
Assembly of collagen fibrils and other multimeric structures | ||||
Collagen biosynthesis and modifying enzymes | ||||
Collagen chain trimerization | ||||
Collagen formation | ||||
Extracellular matrix organization | ||||
GO Term | Evidence | Assigned by | ||
---|---|---|---|---|
Inferred from Direct Assay (IDA) | UniProtKB | |||
Inferred from Direct Assay (IDA) | MGI | |||
Inferred from Physical Interaction (IPI) | UniProtKB | |||
Inferred from High Throughput Direct Assay (HDA) | BHF-UCL | |||
Inferred from Biological aspect of Ancestor (IBA) | GO_Central | |||
Non-traceable Author Statement (NAS) | UniProtKB | |||
Inferred from Electronic Annotation (IEA) | UniProtKB-KW | |||
GWAS Trait | EFO ID | Study Count | SNP Count | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
---|---|---|---|---|---|---|---|---|---|
central corneal thickness | 6 | 7 | 2 | 4.7 | 96.6 | ||||
corneal topography | 1 | 2 | 2 | 74.7 | |||||
eye measurement | 3 | 3 | 3 | 41.9 | |||||
1 | 1 | 1 | 28 | ||||||
intraocular pressure measurement | 1 | 2 | 2 | 17.4 | |||||
GWAS Trait | EFO ID | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
---|---|---|---|---|---|---|---|
central corneal thickness | 2 | 4.7 | 96.6 | ||||
corneal topography | 2 | 74.7 | |||||
eye measurement | 3 | 41.9 | |||||
1 | 28 | ||||||
intraocular pressure measurement | 2 | 17.4 | |||||
Species | Name | Source ID | Gene ID | OMA | EggNOG | Inparanoid | ||
---|---|---|---|---|---|---|---|---|
Mouse | MGI:88457 | 12831 | ||||||
Rat | RGD:70920 | 85490 | ||||||
Dog | collagen type V alpha 1 chain | VGNC:51943 | 480684 | |||||
Horse | collagen type V alpha 1 chain | VGNC:16744 | 100069057 | |||||
Pig | collagen type V alpha 1 chain | 397533 | ||||||
Species | Name | OMA | EggNOG | Inparanoid | ||
---|---|---|---|---|---|---|
Mouse | ||||||
Rat | ||||||
Dog | collagen type V alpha 1 chain | |||||
Horse | collagen type V alpha 1 chain | |||||
Pig | collagen type V alpha 1 chain | |||||
PMID | Year | Title |
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