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Tclin
SELP
P-selectin

Protein Summary
Description
Ca(2+)-dependent receptor for myeloid cells that binds to carbohydrates on neutrophils and monocytes. Mediates the interaction of activated endothelial cells or platelets with leukocytes. The ligand recognized is sialyl-Lewis X. Mediates rapid rolling of leukocyte rolling over vascular surfaces during the initial steps in inflammation through interaction with SELPLG. This gene encodes a 140 kDa protein that is stored in the alpha-granules of platelets and Weibel-Palade bodies of endothelial cells. This protein redistributes to the plasma membrane during platelet activation and degranulation and mediates the interaction of activated endothelial cells or platelets with leukocytes. The membrane protein is a calcium-dependent receptor that binds to sialylated forms of Lewis blood group carbohydrate antigens on neutrophils and monocytes. Alternative splice variants may occur but are not well documented. [provided by RefSeq, Jul 2008]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000263686
  • ENSP00000263686
  • ENSG00000174175

Symbol
  • GMRP
  • GRMP
  • CD62
  • GRMP
  • PSEL
  • CD62P
  • GMP140
  • LECAM3
  • PADGEM
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
protein domain
0.97
disease
0.9
disease perturbation
0.9
chemical
0.86
molecular function
0.81


Related Tools
Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5078.48   (req: < 5)
Gene RIFs: 297   (req: <= 3)
Antibodies: 1106   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 5078.48   (req: >= 5)
Gene RIFs: 297   (req: > 3)
Antibodies: 1106   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 23
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligands: 29
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 1
Approved Drugs (1)
1 – 1 of 1
crizanlizumab
no chemical structure image available
GWAS Traits (2)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
adhesion molecule measurement
1
2
0
14.9
98.6
optic disc size measurement
1
1
1
54.6
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
adhesion molecule measurement
0
14.9
98.6
optic disc size measurement
1
54.6
Orthologs (12)
1 – 5 of 12
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
selectin P
VGNC:6993
736004
Macaque
selectin P
701277
Mouse
MGI:98280
20344
Rat
RGD:3656
25651
Dog
selectin P
VGNC:45985
403994
Species
Name
OMA
EggNOG
Inparanoid
Chimp
selectin P
Macaque
selectin P
Mouse
Rat
Dog
selectin P
Protein Structure (6 Structures, 1 AlphaFold Model)
RepresentationColor Scheme

Click on a row in the table to change the structure displayed.
More information can be found at RCSB PDB

AF-P16109-F1-model_v1

AlphaFold Structures Developed by DeepMind and EMBL-EBI

1 – 5 of 6
PDB Structure Id
Ligand
Method
Resolution (Å)
Residues
Fraction of Total Protein
Pub Year
Title
PDB Structure Id
Fraction of Total Protein
Resolution
Pub Year
Pathways (14)
Cell surface interactions at the vascular wall (R-HSA-202733)

Click on a row in the table to change the structure displayed.

Items per page:
1 – 5 of 5
Data Source
Name
Explore in Pharos
Explore in Source
Reactome
Cell surface interactions at the vascular wall
Reactome
Hemostasis
Reactome
Platelet activation, signaling and aggregation
Reactome
Platelet degranulation
Reactome
Response to elevated platelet cytosolic Ca2+
Name
Explore in Pharos
Explore in Source
Cell surface interactions at the vascular wall
Hemostasis
Platelet activation, signaling and aggregation
Platelet degranulation
Response to elevated platelet cytosolic Ca2+
Gene Ontology Terms (29)
Items per page:
10
1 – 8 of 8
GO Term
Evidence
Assigned by
Inferred from Direct Assay (IDA)
UniProtKB
Inferred from Direct Assay (IDA)
BHF-UCL
Inferred from Direct Assay (IDA)
BHF-UCL
Inferred from Direct Assay (IDA)
UniProtKB
Inferred from Direct Assay (IDA)
BHF-UCL
Inferred from Mutant Phenotype (IMP)
BHF-UCL
Traceable Author Statement (TAS)
BHF-UCL
Inferred from Electronic Annotation (IEA)
Ensembl
Protein-Protein Interactions (247)
1 – 10 of 247
SELPLG
Tbio
Novelty: 0.0016359
Score: 0.999
Data Source: Reactome,STRINGDB
ITGAM
Tbio
Novelty: 0.00017521
Score: 0.97
Data Source: STRINGDB
ITGB2
Tclin
Novelty: 0.00185859
Score: 0.963
Data Source: STRINGDB
AP2M1
Tbio
Novelty: 0.00769368
Score: 0.96
Data Source: STRINGDB
VWF
Tbio
Novelty: 0.00009007
Score: 0.93
Data Source: STRINGDB
WDTC1
Tbio
Novelty: 0.02300849
Score: 0.904
Data Source: STRINGDB
VCAM1
Tchem
Novelty: 0.00022504
Score: 0.9
Data Source: STRINGDB
ICAM1
Tchem
Novelty: 0.00009746
Score: 0.899
Data Source: STRINGDB
SNX17
Tbio
Novelty: 0.03960737
Score: 0.884
Data Source: STRINGDB
F3
Tchem
Novelty: 0.00006457
Score: 0.88
Data Source: STRINGDB
Publication Statistics
PubMed Score  5078.48

PubMed score by year
PubTator Score  3162.95

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer
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