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Tdark
LGALS9C
Galectin-9C

Protein Summary
Description
Binds galactosides. This gene was initially thought to represent a pseudogene of galectin 9; however, this transcript has good exon-intron structure and encodes a predicted protein of the same size as and highly similar to galectin 9. This gene is one of two similar loci on chromosome 17p similar to galectin 9 and now thought to be protein-encoding. This gene is the more telomeric gene. [provided by RefSeq, Jul 2008]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000328114
  • ENSP00000329932
  • ENSG00000171916
  • ENST00000639265
  • ENSP00000491587
  • ENSG00000284021

Symbol
  • Gal-9B
  • LGALS9B
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
virus perturbation
1
tissue
0.41
tissue sample
0.35
biological term
0.34
interacting protein
0.31


IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 2.58   (req: < 5)
View Publications
Gene RIFs: 2   (req: <= 3)
View Gene RIFs
Antibodies: 73   (req: <= 50)
View Antibodies
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 2.58   (req: >= 5)
Gene RIFs: 2   (req: > 3)
Antibodies: 73   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 1
View GO Terms
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
No expression data found
Related Tools
Target Illumination GWAS Analytics (TIGA)
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TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
View Data
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GENEVA
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GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
Go To Tool
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
Go To Tool
ARCHS4
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ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Go To Tool
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (33)
1 – 10 of 33
SLC12A6
Tbio
Family:  Transporter
Novelty:  0.0132619
p_int:  0.999958876
p_ni:  0.000041124
Score:  0.672
Data Source:  BioPlex,STRINGDB
SLC4A7
Tbio
Family:  Transporter
Novelty:  0.011156
p_int:  0.999866192
p_ni:  0.000133807
p_wrong:  1e-9
Score:  0.586
Data Source:  BioPlex,STRINGDB
SLC12A7
Tbio
Family:  Transporter
Novelty:  0.02248904
p_int:  0.999666469
p_ni:  0.000333531
Score:  0.692
Data Source:  BioPlex,STRINGDB
ATP2B4
Tbio
Family:  Transporter
Novelty:  0.00560356
p_int:  0.999611353
p_ni:  0.000388647
Score:  0.527
Data Source:  BioPlex,STRINGDB
SLC38A9
Tbio
Family:  Transporter
Novelty:  0.0879703
p_int:  0.999046043
p_ni:  0.000953957
Score:  0.568
Data Source:  BioPlex,STRINGDB
SLC12A4
Tbio
Family:  Transporter
Novelty:  0.01077688
p_int:  0.998046182
p_ni:  0.001953817
p_wrong:  1e-9
Score:  0.723
Data Source:  BioPlex,STRINGDB
RRAGC
Tbio
Novelty:  0.01462756
p_int:  0.994556755
p_ni:  0.005443244
p_wrong:  1e-9
Score:  0.691
Data Source:  BioPlex,STRINGDB
DCX
Tbio
Novelty:  0.00077614
p_int:  0.97509093
p_ni:  0.024909054
p_wrong:  1.6e-8
Data Source:  BioPlex
SLC4A2
Tbio
Family:  Transporter
Novelty:  0.02448062
p_int:  0.970098808
p_ni:  0.029901192
Score:  0.282
Data Source:  BioPlex,STRINGDB
CD47
Tchem
Novelty:  0.00129086
p_int:  0.966006049
p_ni:  0.033834154
p_wrong:  0.000159798
Score:  0.524
Data Source:  BioPlex,STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (2)
Find Similar Targets
Items per page:
10
1 – 1 of 1
GO Term
Evidence
Assigned by
carbohydrate binding
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Disease Associations ()
No disease associations found
GWAS Traits (2)
Items per page:
1 – 2 of 2
GWAS Trait
EFO ID
ENSG ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
platelet crit
EFO_0007985
ENSG00000171916
1
1
1
7.8
platelet crit
EFO_0007985
ENSG00000284021
1
1
1
7.8
Items per page:
1 – 2 of 2
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
platelet crit
EFO_0007985
1
7.8
platelet crit
EFO_0007985
1
7.8
IDG Resources
No IDG generated resources found
Orthologs (5)
1 – 5 of 5
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Mouse
lectin, galactose binding, soluble 9
MGI:109496
16859
Rat
galectin 9
RGD:3005
25476
Dog
galectin 9
442861
Cow
galectin 9
510813
Pig
galectin 9
396972
Species
Name
OMA
EggNOG
Inparanoid
Mouse
lectin, galactose binding, soluble 9
Rat
galectin 9
Dog
galectin 9
Cow
galectin 9
Pig
galectin 9
Publication Statistics
PubMed Score 2.58
PubMed score by year
PubTator Score 1.61
PubTator score by year
Related Publications
Items per page:
0 of 0
PMID
Year
Title