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Tdark
FAM9A
Protein FAM9A

Protein Summary
Description
This gene is a member of a gene family which arose through duplication on the X chromosome. The encoded protein may be a nuclear protein that is localized to the nucleolus, and has some similarity to a synaptonemal complex protein. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Aug 2011]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000381003
  • ENSP00000370391
  • ENSG00000183304
  • ENST00000543214
  • ENSP00000440163

Symbol
  • TEX39A
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
transcription factor
0.57
cell line
0.5
chemical
0.41
protein complex
0.4
tissue
0.4


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.11   (req: < 5)
Gene RIFs: 1   (req: <= 3)
Antibodies: 6   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.11   (req: >= 5)
Gene RIFs: 1   (req: > 3)
Antibodies: 6   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 3
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (3)
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (22)
GOPC
Tbio
Novelty:  0.01110168
p_int:  0.999999254
p_ni:  7.46e-7
Data Source:  BioPlex
NAP1L3
Tbio
Novelty:  0.03907508
p_int:  0.999997916
p_ni:  0.000002079
p_wrong:  5e-9
Score:  0.228
Data Source:  BioPlex,STRINGDB
NAF1
Tbio
Novelty:  2.99493689
p_int:  0.999991125
p_ni:  0.000008814
p_wrong:  6.1e-8
Score:  0.204
Data Source:  BioPlex,STRINGDB
CAVIN1
Tbio
Family:  Enzyme
Novelty:  0.00780634
p_int:  0.998712775
p_ni:  0.001287225
Score:  0.209
Data Source:  BioPlex,STRINGDB
CWC22
Tbio
Novelty:  0.027689
p_int:  0.991450601
p_ni:  0.008549399
Data Source:  BioPlex
MLLT3
Tchem
Novelty:  0.00361056
p_int:  0.99031148
p_ni:  0.00968852
Data Source:  BioPlex
AFF4
Tbio
Family:  TF
Novelty:  0.02113896
p_int:  0.98654939
p_ni:  0.013418456
p_wrong:  0.000032153
Data Source:  BioPlex
AP3B1
Tbio
Novelty:  0.03117931
p_int:  0.984379262
p_ni:  0.015620738
Data Source:  BioPlex
SRRM2
Tbio
Novelty:  0.03914644
p_int:  0.935563348
p_ni:  0.064436652
Score:  0.159
Data Source:  BioPlex,STRINGDB
NOLC1
Tbio
Novelty:  0.01922261
p_int:  0.926606589
p_ni:  0.073393411
Score:  0.204
Data Source:  BioPlex,STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (5)
Find Similar Targets
Items per page:
10
1 – 2 of 2
GO Term
Evidence
Assigned by
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Electronic Annotation (IEA)
UniProtKB-SubCell
Disease Associations (null)
No disease associations found
GWAS Traits (0)
No GWAS traits found
IDG Resources
No IDG generated resources found
Orthologs
No orthologs found
Publication Statistics
PubMed Score 1.11
PubMed score by year
PubTator Score 0.81
PubTator score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title