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Tdark
FAM90A1
Protein FAM90A1

Protein Summary
Description
FAM90A1 belongs to subfamily I of the primate-specific FAM90A gene family, which originated from multiple duplications and rearrangements (Bosch et al., 2007 [PubMed 17684299]).[supplied by OMIM, Oct 2009]
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000307435
  • ENSP00000307798
  • ENSG00000171847
  • ENST00000538603
  • ENSP00000445418
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
virus perturbation
0.9
tissue sample
0.66
cell line
0.59
cell type or tissue
0.59
tissue
0.55


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 0.82   (req: < 5)
Gene RIFs: 0   (req: <= 3)
Antibodies: 31   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 0.82   (req: >= 5)
Gene RIFs: 0   (req: > 3)
Antibodies: 31   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
No expression data found
Related Tools
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (27)
BRD3
Tchem
Family:  Epigenetic
Novelty:  0.00335409
p_int:  1
Score:  0.811
Data Source:  BioPlex,STRINGDB
FAM90A26
Tdark
p_int:  1
Score:  0.4
Data Source:  BioPlex,STRINGDB
BRD4
Tchem
Family:  Epigenetic
Novelty:  0.0013933
p_int:  1
Score:  0.201
Data Source:  BioPlex,STRINGDB
FAM90A5P
Tdark
p_int:  0.999999999
p_wrong:  1e-9
Score:  0.4
Data Source:  BioPlex,STRINGDB
BRD2
Tchem
Family:  Epigenetic
Novelty:  0.00531003
p_int:  0.999999985
p_ni:  1.5e-8
Score:  0.787
Data Source:  BioPlex,STRINGDB
KDM5B
Tchem
Family:  TF; Epigenetic
Novelty:  0.00610414
p_int:  0.999998826
p_ni:  1.57e-7
p_wrong:  0.000001017
Score:  0.309
Data Source:  BioPlex,STRINGDB
RFPL4A
Tdark
Novelty:  0.36360558
p_int:  0.999990875
p_ni:  1.85e-7
p_wrong:  0.00000894
Score:  0.862
Data Source:  BioPlex,STRINGDB
MTMR14
Tbio
Family:  Enzyme
Novelty:  0.07074944
p_int:  0.9949988
p_ni:  0.005001199
p_wrong:  2e-9
Score:  0.234
Data Source:  BioPlex,STRINGDB
FLNA
Tbio
Novelty:  0.00156479
p_int:  0.994417952
p_ni:  0.005582048
Score:  0.234
Data Source:  BioPlex,STRINGDB
RFPL4B
Tdark
Novelty:  2.42779597
p_int:  0.991764634
p_ni:  4e-9
p_wrong:  0.008235362
Data Source:  BioPlex
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (0)
No GO Terms found
Disease Associations ()
No disease associations found
GWAS Traits (2)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
velopharyngeal dysfunction
1
1
1
21.5
gut microbiome measurement
1
1
0
5.6
2.9
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
velopharyngeal dysfunction
1
21.5
gut microbiome measurement
0
5.6
2.9
IDG Resources
No IDG generated resources found
Orthologs (3)
1 – 3 of 3
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
family with sequence similarity 90 member A1
VGNC:5377
748455
Mouse
MGI:1921682
631145
Horse
putative protein FAM90A9P
102149959
Species
Name
OMA
EggNOG
Inparanoid
Chimp
family with sequence similarity 90 member A1
Mouse
Horse
putative protein FAM90A9P
Publication Statistics
PubMed Score 0.82
PubMed score by year
PubTator Score 0.25
PubTator score by year
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Related Publications
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PMID
Year
Title