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Tbio
PRDM13
PR domain zinc finger protein 13

Protein Summary
Description
May be involved in transcriptional regulation.
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000369215
  • ENSP00000358217
  • ENSG00000112238

Symbol
  • PFM10
  • PFM10
  • MU-MB-20.220
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
cell type or tissue
0.71
protein domain
0.58
PubMedID
0.58
tissue
0.58
biological process
0.57


Related Tools
GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 15.98   (req: < 5)
Gene RIFs: 3   (req: <= 3)
Antibodies: 112   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 15.98   (req: >= 5)
Gene RIFs: 3   (req: > 3)
Antibodies: 112   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Terms: 8
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Orthologs (10)
1 – 5 of 10
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
PR/SET domain 13
VGNC:3670
472081
Mouse
MGI:2448528
230025
Rat
RGD:1589883
689695
Dog
PR/SET domain 13
VGNC:54341
481934
Cow
PR/SET domain 13
VGNC:33291
510505
Species
Name
OMA
EggNOG
Inparanoid
Chimp
PR/SET domain 13
Mouse
Rat
Dog
PR/SET domain 13
Cow
PR/SET domain 13
Gene Ontology Terms (9)
Items per page:
10
1 – 6 of 6
GO Term
Evidence
Assigned by
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Biological aspect of Ancestor (IBA)
GO_Central
Inferred from Sequence Alignment (ISA)
NTNU_SB
Inferred from Electronic Annotation (IEA)
UniProtKB-KW
Protein-Protein Interactions (23)
1 – 10 of 23
TLX1
Tbio
Family: TF
Novelty: 0.00619542
Score: 0.787
Data Source: STRINGDB
TLX3
Tbio
Family: TF
Novelty: 0.01152722
Score: 0.74
Data Source: STRINGDB
PTF1A
Tbio
Family: TF
Novelty: 0.00593299
Score: 0.718
Data Source: STRINGDB
ZNF488
Tdark
Novelty: 0.41027707
Score: 0.624
Data Source: STRINGDB
ASCL1
Tbio
Family: TF
Novelty: 0.00274239
Score: 0.583
Data Source: STRINGDB
FBXL4
Tbio
Novelty: 0.04286856
Score: 0.563
Data Source: STRINGDB
PHOX2A
Tbio
Family: TF
Novelty: 0.01226024
Score: 0.537
Data Source: STRINGDB
CCNC
Tbio
Novelty: 0.00585842
Score: 0.53
Data Source: STRINGDB
DRGX
Tbio
Family: TF
Novelty: 0.0397402
Score: 0.522
Data Source: STRINGDB
NEUROG1
Tbio
Family: TF
Novelty: 0.00494095
Score: 0.514
Data Source: STRINGDB
Publication Statistics
PubMed Score  15.98

PubMed score by year
PubTator Score  6.44

PubTator score by year
Amino Acid Sequence
Residue Counts
Protein Sequence
ProtVista Viewer