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See interacting proteins on String-db.org
Heirarchical classifications for this protein from different ontologies.
Classes for this protein according to Protein ANalysis THrough Evolutionary Relationships (PANTHER) Classification System.
Explore targets in this PANTHER class
click for section description and definitions
Gene symbols, accession ids and various other target identifiers. Also contains the illumination graph which highlights the amount of knowledge available. Click the '?' button for more information
Description of the protein which includes the UniProt Function and the NCBI Gene Summary.
Uniprot linked accession values, symbols or commonly used abbreviations associated with this particular target.
Approved gene symbol with link to HUGO Gene Nomenclature Committee.
Ensembl identifier links.
List of abbreviations or acronyms of the full target name.
Radar plot depicting the variety of knowledge obtained by Pharos for a particular target. The more spikes in the plot, the more variety. The longer the length, the higher the quantity of that particular knowledge. Clicking the illumination graph opens an expanded view to explore the plot fuller by seeing plot with annotations of the different radii.
Table representing the top 5 knowledge attributes in the illumination graph. The knowledge value property is on a scale of 0 to 1.
Descriptions of the IDG illumination level highlighting the milestones attained in the research of this target.
Jensen Lab generated fractional counting score for the prevalence of this gene in Pubmed articles.
Total count of NCBI Gene Reference Into Function hits for target listed in parenthesis, and summary table with links to publications per PMID with the specific text in article that includes the reported target.
Number of antibodies for this target listed in antibodypedia.com
Number of Gene Ontology (GO) annotations for this target, consisting of the sum of GO Functions and GO Processes.
Ligands associated with a target, listed in ChEMBL, with activity over a cutoff relative to the targetclass.
Approved drugs associated with a target.
List of proteins and ligands sourced from the RCSB PDB database
List of protein to protein interactions associated with this gene. Interactions are reported from Reactome, BioPlex, and StringDB. StringDB score must be above 0.400 to be shown here. Explore on the String-DB website to see lower likelihood targets.
Opens the Target List with this set of targets
Melanoma-associated antigen 10
Tin-X metric for the relative scarcity of specific publications for this target.
BioPlex score representing the probability of the protein protein interaction.
BioPlex score representing the probability that the interacting protein was wrongly identified.
String-DB score representing the confidence in the protein protein interaction.
Data Sources reporting this protein-protein interaction.
Testis-specific Y-encoded-like protein 4
BioPlex score representing the probability that the interaction detected was non-specific.
RelA-associated inhibitor
Melanoma-associated antigen 9
Melanoma-associated antigen B16
Nuclear protein MDM1
E3 ubiquitin-protein ligase RAD18
A broad classification of protein families
Cytochrome b-c1 complex subunit 7
Tigger transposable element-derived protein 5
Coiled-coil domain-containing protein 85B
Statistics about the occurence of this target in literature, extracted via text mining. GeneRIFs,and text-mined publications are also displayed. For more details, click the '?' button.
The Pubmed Score (also sometimes referred to as the Jensen Score) is
derived from text mining a set of Pubmed abstracts.
Timeline of pubtator scores for each available year.
Amino acid sequence, and a detailed sequence structure viewer via the Uniprot Protvista viewer.
Bar chart summarizing the number of times each residue appears in the sequence. The bars represent the actual counts, while the gold lines represent the expected counts given the frequency of the amino acids in all human genes.
Amino acid sequence of target protein, bar graph summarizing quantity of each amino acid. Click on looking glass icon for ability to conduct sequence search.
List of targets within Pharos that are related to this target.
Occurrence of target in the 10 categories of UniProt keywords.