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Tbio
CDR2
Cerebellar degeneration-related protein 2

Protein Summary
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000268383
  • ENSP00000268383
  • ENSG00000140743

Symbol
  • PCD17
  • Yo
  • CDR62
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
kinase perturbation
0.95
gene perturbation
0.89
virus perturbation
0.85
transcription factor perturbation
0.8
disease perturbation
0.74


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 653.42   (req: < 5)
Gene RIFs: 12   (req: <= 3)
Antibodies: 362   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 653.42   (req: >= 5)
Gene RIFs: 12   (req: > 3)
Antibodies: 362   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (4)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA
Thumbnail image for GENEVA
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (73)
FAM184A
Tdark
Novelty:  2.0967899
p_int:  0.999999988
p_ni:  3e-9
p_wrong:  9e-9
Score:  0.224
Data Source:  BioPlex,STRINGDB
CDR2L
Tbio
Novelty:  0.09295886
p_int:  0.999999982
p_ni:  1.8e-8
Score:  0.732
Data Source:  BioPlex,STRINGDB
SSX3
Tdark
Novelty:  0.2308992
p_int:  0.999998329
p_ni:  0.000001672
Score:  0.671
Data Source:  BioPlex,STRINGDB
STX1A
Tbio
Novelty:  0.00087207
p_int:  0.999998131
p_ni:  0.000001867
p_wrong:  1e-9
Score:  0.237
Data Source:  BioPlex,STRINGDB
IGSF3
Tbio
Novelty:  0.07528465
p_int:  0.999997391
p_ni:  0.000002609
Score:  0.619
Data Source:  BioPlex,STRINGDB
KTN1
Tbio
Novelty:  0.01436672
p_int:  0.99998341
p_ni:  0.00001659
Score:  0.529
Data Source:  BioPlex,STRINGDB
C4orf46
Tdark
Novelty:  0.77486427
p_int:  0.999961542
p_ni:  8e-9
p_wrong:  0.000038451
Score:  0.224
Data Source:  BioPlex,STRINGDB
CCDC18
Tdark
Novelty:  0.61246881
p_int:  0.99984519
p_ni:  0.00015479
p_wrong:  1.9e-8
Score:  0.177
Data Source:  BioPlex,STRINGDB
STXBP4
Tbio
Novelty:  0.08831326
p_int:  0.999631532
p_ni:  0.000368468
Score:  0.151
Data Source:  BioPlex,STRINGDB
SPPL2B
Tchem
Family:  Enzyme
Novelty:  0.0274774
p_int:  0.999592787
p_ni:  0.000407213
Data Source:  BioPlex
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (1)
Find Similar Targets
Items per page:
10
1 – 1 of 1
GO Term
Evidence
Assigned by
Inferred from Electronic Annotation (IEA)
Ensembl
Disease Associations (null)
No disease associations found
GWAS Traits (1)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
body height
1
1
1
42.3
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
body height
1
42.3
IDG Resources
No IDG generated resources found
Orthologs (13)
1 – 5 of 13
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
cerebellar degeneration related protein 2
VGNC:9021
454352
Macaque
cerebellar degeneration related protein 2
698974
Mouse
MGI:1100885
12585
Rat
RGD:1310578
308958
Dog
cerebellar degeneration related protein 2
VGNC:39078
479811
Species
Name
OMA
EggNOG
Inparanoid
Chimp
cerebellar degeneration related protein 2
Macaque
cerebellar degeneration related protein 2
Mouse
Rat
Dog
cerebellar degeneration related protein 2
Publication Statistics
PubMed Score 653.42
PubMed score by year
PubTator Score 214.90
PubTator score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title