Protein Summary
May act as a negative regulator of ASF1 in chromatin assembly. This gene encodes a protein that appears to play a role in nuclear envelope integrity, possibly related to microtubule attachments. Mutations in this gene cause congenital dyserythropoietic anemia type I, a disease resulting in morphological and functional abnormalities of erythropoiesis. [provided by RefSeq, Jul 2009]
- ENST00000356231
- ENSP00000348564
- ENSG00000140326
- DLT
- CDA1
- CDAI
- CDAN1A
- PRO1295
Most Knowledge About | Knowledge Value
(0 to 1 scale) | ||
|---|---|---|---|
disease perturbation | 0.79 | ||
histone modification site profile | 0.73 | ||
tissue | 0.56 | ||
tissue sample | 0.56 | ||
cell type or tissue | 0.53 | ||
Protein Classes
IDG Development Level Summary
These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
Pubmed score: 174.73 (req: < 5)
Gene RIFs: 10 (req: <= 3)
Antibodies: 109 (req: <= 50)
These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:
Pubmed score: 174.73 (req: >= 5)
Gene RIFs: 10 (req: > 3)
Antibodies: 109 (req: > 50)
- OR - satisfy the following criterion:
Gene Ontology Terms: 4
Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions
Active Ligand: 0
Target has at least one approved drug - AND - satisfies the preceding conditions
Active Drug: 0
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Expression Data (0 Tissues)
Related Tools
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GENEVA (GENe Expression Variance Analysis) allows you to identify RNA-sequencing datasets from the Gene Expression Omnibus (GEO) that contain conditions modulating a gene or a gene signature.
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
Active Ligands (0)
Protein-Protein Interactions (46)
ASF1B
Novelty: 0.05716701
p_int: 0.999999996
p_ni: 3e-9
p_wrong: 1e-9
Score: 0.707
Data Source: BioPlex,STRINGDB
ASF1A
Novelty: 0.02544466
p_int: 0.999999993
p_ni: 6e-9
p_wrong: 1e-9
Score: 0.663
Data Source: BioPlex,STRINGDB
MAMDC2
Novelty: 0.22933145
p_int: 0.997387179
p_ni: 0.00260165
p_wrong: 0.000011172
Score: 0.622
Data Source: BioPlex,STRINGDB
Nearest Tclin Targets
Pathways (0)
Viral Interactions (0)
Gene Ontology Terms (10)
Components (6)
Processes (4)
GO Term | Evidence | Assigned by | ||
|---|---|---|---|---|
Inferred from Direct Assay (IDA) | UniProtKB | |||
Inferred from Direct Assay (IDA) | HPA | |||
Inferred from Direct Assay (IDA) | MGI | |||
Inferred from Direct Assay (IDA) | UniProtKB | |||
Inferred from Direct Assay (IDA) | HPA | |||
Inferred from Electronic Annotation (IEA) | UniProtKB-KW | |||
Disease Associations ()
GWAS Traits (5)
Items per page:
1 – 5 of 5
GWAS Trait | EFO ID | Study Count | SNP Count | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
|---|---|---|---|---|---|---|---|---|---|
triglyceride measurement | 1 | 1 | 2 | 79.8 | |||||
high density lipoprotein cholesterol measurement | 1 | 1 | 2 | 68 | |||||
hematocrit | 1 | 1 | 1 | 38.2 | |||||
IGF-1 measurement | 1 | 1 | 1 | 33.1 | |||||
bipolar I disorder | 1 | 1 | 0 | 1.1 | 3.8 | ||||
Items per page:
1 – 5 of 5
GWAS Trait | EFO ID | Beta Count | Odds Ratio | Evidence (Mean Rank Score) | Provenance | ||
|---|---|---|---|---|---|---|---|
triglyceride measurement | 2 | 79.8 | |||||
high density lipoprotein cholesterol measurement | 2 | 68 | |||||
hematocrit | 1 | 38.2 | |||||
IGF-1 measurement | 1 | 33.1 | |||||
bipolar I disorder | 0 | 1.1 | 3.8 | ||||
Find similar targets by:
IDG Resources
Orthologs (15)
1 – 5 of 15
Species | Name | Source ID | Gene ID | OMA | EggNOG | Inparanoid | ||
|---|---|---|---|---|---|---|---|---|
Chimp | codanin 1 | VGNC:3568 | 741717 | |||||
Macaque | codanin 1 | 708838 | ||||||
Mouse | MGI:1916218 | 68968 | ||||||
Rat | RGD:1306771 | 311348 | ||||||
Dog | codanin 1 [Source:HGNC Symbol;Acc:HGNC:1713] | |||||||
Species | Name | OMA | EggNOG | Inparanoid | ||
|---|---|---|---|---|---|---|
Chimp | codanin 1 | |||||
Macaque | codanin 1 | |||||
Mouse | ||||||
Rat | ||||||
Dog | codanin 1 [Source:HGNC Symbol;Acc:HGNC:1713] | |||||
Publication Statistics
PubMed Score 174.73
PubMed score by year
PubTator Score 136.71
PubTator score by year
Related Publications
Text Mined References (16)
GeneRif Annotations (10)
Items per page:
0 of 0
PMID | Year | Title |
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