Tdark C4orf48 Neuropeptide-like protein C4orf48

Protein Summary

Uniprot Accession IDs

• Q5BLP8
• B6ZDN0
• B7ZBI7
• B7ZBI8
• X6RBU3

Gene Name

• C4orf48

Ensembl ID

• ENST00000409248
• ENSP00000386807
• ENSG00000243449
• ENST00000409860
• ENSP00000386528

Symbol

• CHR4_55

Knowledge Table

Most Knowledge About	Knowledge Value (0 to 1 scale)
biological process	0
biological term	0
cell line	0
cell type or tissue	0
cellular component	0

Protein Classes

No PANTHER Classes or DTO Classes found

IDG Development Level Summary

Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.55   (req: < 5)

Gene RIFs: 1   (req: <= 3)

Antibodies: 4   (req: <= 50)

Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.55   (req: >= 5)

Gene RIFs: 1   (req: > 3)

Antibodies: 4   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 0

Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0

Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0

Expression Data (0 Tissues)

tutorial

No expression data found

Protein Sequence and Structure

Residue Counts

Protein Sequence

Find Targets by Sequence

Show Full Sequence

ProtVista Viewer

Related Tools (2)

GlyGen

GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.

Go To Tool

ARCHS4

ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.

Go To Tool

Approved Drugs (0)

No approved drugs found

Active Ligands (0)

No active ligands found

Protein-Protein Interactions (6)

Explore Interacting Targets

1 – 6 of 6

• See Interactions on String-DB

NELL2

Tbio

Family:  Enzyme

Novelty:  0.03760438

p_int:  0.998755473

p_ni:  0.001244527

Score:  0.219

Data Source:  BioPlex,STRINGDB

NELL1

Tbio

Family:  Enzyme

Novelty:  0.01325888

p_int:  0.99336162

p_ni:  0.00663838

Score:  0.206

Data Source:  BioPlex,STRINGDB

TGFB1

Tbio

Novelty:  0.0001299

p_int:  0.873285733

p_ni:  0.126714028

p_wrong:  2.39e-7

Score:  0.516

Data Source:  BioPlex,STRINGDB

LRRC55

Tbio

Family:  IC

Novelty:  0.25121277

p_int:  0.829926221

p_ni:  0.170060971

p_wrong:  0.000012807

Data Source:  BioPlex

LRRC52

Tbio

Family:  IC

Novelty:  0.15407898

p_int:  0.805768676

p_ni:  0.194217519

p_wrong:  0.000013805

Data Source:  BioPlex

CCNI

Tbio

Novelty:  0.01655153

Score:  0.426

Data Source:  STRINGDB

Nearest Tclin Targets

Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.

Pathways (0)

No pathways found

Viral Interactions (0)

No viral interactions found

Gene Ontology Terms (1)

Components (1)

Find Similar Targets

Items per page:

10

1 – 1 of 1

GO Term	Evidence	Assigned by
extracellular region	Inferred from Electronic Annotation (IEA)	UniProtKB-SubCell

Disease Associations (null)

No disease associations found

GWAS Traits (0)

No GWAS traits found

Find similar targets by:

UniProt Keyword Find Similar Targets

No Header	No Header
Alternative splicing
Complete proteome
Reference proteome
Secreted
Signal

IDG Resources

No IDG generated resources found

Orthologs (6)

1 – 5 of 6

Species	Name	Source ID	Gene ID	OMA	EggNOG	Inparanoid
Chimp	chromosome 4 C4orf48 homolog	VGNC:6473	461072
Macaque	chromosome 4 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:34437]
Mouse	predicted gene 1673	MGI:2686519	381633
Rat	RGD1560394	RGD:1560394	289728
Cow	chromosome 6 C4orf48 homolog	VGNC:52725	615222

Species	Name	OMA	EggNOG	Inparanoid
Chimp	chromosome 4 C4orf48 homolog
Macaque	chromosome 4 open reading frame 48 [Source:HGNC Symbol;Acc:HGNC:34437]
Mouse	predicted gene 1673
Rat	RGD1560394
Cow	chromosome 6 C4orf48 homolog

Publication Statistics

PubMed Score 1.55

PubMed score by year

Reset Zoom

PubTator Score 1.00

PubTator score by year

Reset Zoom

Related Publications

Text Mined References (3)

GeneRif Annotations (1)

Items per page:

10

0 of 0

PMID	Year	Title