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Tdark
C1orf52
UPF0690 protein C1orf52

Protein Summary
Uniprot Accession IDs
Gene Name
Ensembl ID
  • ENST00000344356
  • ENSP00000345092
  • ENSG00000162642
  • ENST00000471115
  • ENSP00000419417

Symbol
  • BAG
  • gm117
Illumination Graph
Knowledge Table
Most Knowledge About
Knowledge Value (0 to 1 scale)
biological process
0
biological term
0
cell line
0
cell type or tissue
0
cellular component
0


Protein Classes
No PANTHER Classes or DTO Classes found
IDG Development Level Summary
Tdark

These are targets about which virtually nothing is known. They do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.1   (req: < 5)
Gene RIFs: 1   (req: <= 3)
Antibodies: 44   (req: <= 50)
Tbio

These targets do not have known drug or small molecule activities
- AND - satisfy two or more of the following criteria:

Pubmed score: 1.1   (req: >= 5)
Gene RIFs: 1   (req: > 3)
Antibodies: 44   (req: > 50)

- OR - satisfy the following criterion:

Gene Ontology Term: 1
Tchem

Target has at least one ChEMBL compound with an activity cutoff of < 30 nM - AND - satisfies the preceding conditions

Active Ligand: 0
Tclin

Target has at least one approved drug - AND - satisfies the preceding conditions

Active Drug: 0
Expression Data (0 Tissues)
No expression data found
Protein Sequence and Structure
Residue Counts
Protein Sequence
ProtVista Viewer
Related Tools (3)
Target Illumination GWAS Analytics (TIGA)
Thumbnail image for Target Illumination GWAS Analytics (TIGA)
TIGA scores and ranks GWAS discovered associations according to the quantity and quality of the evidence supporting the association.
GlyGen
Thumbnail image for GlyGen
GlyGen is a data integration and dissemination project for carbohydrate and glycoconjugate related data.
ARCHS4
Thumbnail image for ARCHS4
ARCHS4 provides access to gene-function predictions based on RNA-seq co-expression, and gene expression levels across cell and tissues.
Approved Drugs (0)
No approved drugs found
Active Ligands (0)
No active ligands found
Protein-Protein Interactions (19)
DENND2D
Tbio
Novelty:  0.16496649
p_int:  0.98873053
p_ni:  0.011269433
p_wrong:  3.7e-8
Score:  0.188
Data Source:  BioPlex,STRINGDB
DEF6
Tbio
Novelty:  0.0378487
p_int:  0.967339804
p_ni:  0.032631208
p_wrong:  0.000028988
Score:  0.188
Data Source:  BioPlex,STRINGDB
GPX7
Tbio
Family:  Enzyme
Novelty:  0.01342855
p_int:  0.947896444
p_ni:  0.051961683
p_wrong:  0.000141874
Data Source:  BioPlex
LHX4
Tbio
Family:  TF
Novelty:  0.02047732
p_int:  0.831894579
p_ni:  0.167974122
p_wrong:  0.000131299
Score:  0.187
Data Source:  BioPlex,STRINGDB
FGF12
Tbio
Novelty:  0.02094849
p_int:  0.822247665
p_ni:  0.01235361
p_wrong:  0.165398725
Data Source:  BioPlex
ZNHIT6
Tbio
Novelty:  1.1021845
Score:  0.713
Data Source:  STRINGDB
UBTD1
Tdark
Novelty:  0.50393104
Score:  0.704
Data Source:  STRINGDB
CTSD
Tchem
Family:  Enzyme
Novelty:  0.00029823
Score:  0.573
Data Source:  STRINGDB
DDAH1
Tchem
Family:  Enzyme
Novelty:  0.00354695
Score:  0.54
Data Source:  STRINGDB
SYDE2
Tdark
Family:  Enzyme
Novelty:  1.77288781
Score:  0.534
Data Source:  STRINGDB
Nearest Tclin Targets
Nearest Tclin calculations are only available for targets with KEGG Pathway annotations.
Pathways (0)
No pathways found
Viral Interactions (0)
No viral interactions found
Gene Ontology Terms (2)
Find Similar Targets
Items per page:
10
1 – 1 of 1
GO Term
Evidence
Assigned by
Inferred from High Throughput Direct Assay (HDA)
UniProtKB
Disease Associations (null)
No disease associations found
GWAS Traits (3)
GWAS Trait
EFO ID
Study Count
SNP Count
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
2
3
0
1.2
90.7
asymmetrical dimethylarginine measurement
1
1
1
80.2
inflammatory biomarker measurement
1
1
0
31.1
17.1
GWAS Trait
EFO ID
Beta Count
Odds Ratio
Evidence (Mean Rank Score)
Provenance
0
1.2
90.7
asymmetrical dimethylarginine measurement
1
80.2
inflammatory biomarker measurement
0
31.1
17.1
IDG Resources
No IDG generated resources found
Orthologs (12)
1 – 5 of 12
Species
Name
Source ID
Gene ID
OMA
EggNOG
Inparanoid
Chimp
chromosome 1 C1orf52 homolog
VGNC:11746
736413
Macaque
chromosome 1 open reading frame, human C1orf52
711232
Mouse
MGI:1913671
66421
Rat
RGD:1560065
499724
Dog
chromosome 6 C1orf52 homolog
VGNC:52579
612531
Species
Name
OMA
EggNOG
Inparanoid
Chimp
chromosome 1 C1orf52 homolog
Macaque
chromosome 1 open reading frame, human C1orf52
Mouse
Rat
Dog
chromosome 6 C1orf52 homolog
Publication Statistics
PubMed Score 1.10
PubMed score by year
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Related Publications
Items per page:
0 of 0
PMID
Year
Title