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  6. Zinc finger protein 562

Tdark Zinc finger protein 562

May be involved in transcriptional regulation.

 Comments

Property Summary

NCBI Gene PubMed Count 5
PubMed Score 0.00

Knowledge Summary

Patent

No data available

TINX Plot

  Disease (1)

Disease Target Count P-value
spina bifida 1064 3.5e-02

Expression

  Differential Expression (1)

Disease log2 FC p
spina bifida -1.449 3.5e-02

Synonym

Accession Q6V9R5 Q32MN2 Q9NXS5
Symbols

Gene

ZNF562

PANTHER Protein Class (3)

  Ortholog (1)

Species Source Disease
Macaque OMA Inparanoid

 UniProt Keyword (12)

See all...

 GO Function (2)

 GO Component (1)

 GO Process (2)

 Compartment GO Term (11)

 HCA RNA Cell Line (56)

See all...

Pathway (3)

Protein-protein Interaction (9)

SMARCAD1   CBX5   ZNF561   PRAME   ISLR   TRIM39   KNG1   RNF187   TRIM41  

Gene RIF (1)

PMID Text
20379614 Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)

AA Sequence 

MSAFDMSHGFFPREPICPFEEKTKIGTMVEDHRSNSYQDSVTFDDVAVEFTPEEWALLDTTQKYLYRDVM      1 - 70
LENYMNLASVDFFFCLTSEWEIQPRTKRSSLQQGFLKNQIFTGIQMQTRSYSGWKLCENCGEVFSEQFCL     71 - 140
KTHMRAQNGGNTFEGNCYGKDSISVHKEASIGQELSKFNPCGKVFTLTPGLAVHLEILNGRQPYKCKECG    141 - 210
KGFKYFASLDNHMGIHIGEKLCEFQECERAITTSSHLKQCVAVHTGKKSEKTKNCGKSFTNFSQLSAHAK    211 - 280
THKGEKSFECKECGRSFRNSSSFNVHIQIHTGIKPHKCTECGKAFTRSTHLTQHVRTHTGIKPYECKECG    281 - 350
QAFTQYTGLAIHIRNHTGEKPYQCKECGKAFNRSSTLTQHRRIHTGEKPYECVECGKTFITSSHRSKHLK    351 - 420
THSGER                                                                    421 - 426
//

Text Mined References (6)

PMID Year Title
20379614 Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
15489334 2004 The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
15342556 2004 Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions.
14702039 2004 Complete sequencing and characterization of 21,243 full-length human cDNAs.
12477932 2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
11827452 2002 Gene expression profile of human bone marrow stromal cells: high-throughput expressed sequence tag sequencing analysis.