Property Summary

NCBI Gene PubMed Count 16
PubMed Score 45.89
PubTator Score 85.09

Knowledge Summary

Patent

No data available

TINX Plot

  Disease Sources (3)

Disease Target Count P-value
psoriasis 6685 3.36961778810504E-57
breast carcinoma 1614 4.01697537776881E-44
glioblastoma multiforme 347 8.7123338077556E-20
astrocytoma 1493 4.49809040187719E-16
posterior fossa group A ependymoma 1511 1.074999614358E-11
Breast cancer 3099 4.23994033662768E-9
lung carcinoma 2844 2.83951563466229E-8
ovarian cancer 8492 3.04853284077597E-6
adrenocortical carcinoma 1427 5.83146004968273E-6
sonic hedgehog group medulloblastoma 1482 4.67465973972187E-5
intraductal papillary-mucinous carcinoma (IPMC) 2988 1.28311500005525E-4
intraductal papillary-mucinous adenoma (IPMA) 2956 3.00755336835416E-4
osteosarcoma 7933 5.96099000958692E-4
pediatric high grade glioma 2712 9.33428010996918E-4
pancreatic cancer 2300 0.00309397176156432
intraductal papillary-mucinous neoplasm (IPMN) 3289 0.00484579711699947
invasive ductal carcinoma 2950 0.0105620959366058
primary pancreatic ductal adenocarcinoma 1271 0.0105914321681208
interstitial lung disease 292 0.0174848462534143
oligodendroglioma 2849 0.0184785899917138
atypical teratoid / rhabdoid tumor 4369 0.0288528514381481
subependymal giant cell astrocytoma 2287 0.0441415632797919
Disease Target Count Z-score Confidence
Carcinoma 2147 0.0 1.0
Disease Target Count Z-score Confidence
Dental caries 67 0.0 1.0

Expression

Synonym

Gene

BOC

PDB

3N1G   3N1M   3N1P  

  Ortholog (10)

Species Source
Chimp OMA EggNOG
Macaque OMA EggNOG Inparanoid
Mouse OMA Inparanoid
Rat OMA EggNOG Inparanoid
Cow OMA EggNOG Inparanoid
Opossum OMA EggNOG Inparanoid
Platypus OMA EggNOG
Chicken OMA Inparanoid
Anole lizard OMA Inparanoid
Xenopus OMA Inparanoid

 GWAS Trait (1)

Gene RIF (6)

PMID Text
20519495 Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner
20306291 Observational study and genome-wide association study of gene-disease association. (HuGE Navigator)
20053908 Boc receptor is required for segregation of ipsilateral axons at the optic chiasm and, conversely, Boc expression in contralateral retinal ganglion cells prevents their axons from crossing the optic chiasm.
16647304 Cdo and Boc bind Shh through a high-affinity interaction with a specific fibronectin repeat that is essential for activity.
12720294 CDO and BOC play a role in differentiation of cells in the skeletal muscle lineage
11782431 BOC, along with CDO, defines a new subfamily of the immunoglobulin superfamily that is conserved from Drosophila to man. BOC and CDO form a putative receptor complex that stimulates differentiation of myoblasts.

AA Sequence

MLRGTMTAWRGMRPEVTLACLLLATAGCFADLNEVPQVTVQPASTVQKPGGTVILGCVVEPPRMNVTWRL      1 - 70
NGKELNGSDDALGVLITHGTLVITALNNHTVGRYQCVARMPAGAVASVPATVTLANLQDFKLDVQHVIEV     71 - 140
DEGNTAVIACHLPESHPKAQVRYSVKQEWLEASRGNYLIMPSGNLQIVNASQEDEGMYKCAAYNPVTQEV    141 - 210
KTSGSSDRLRVRRSTAEAARIIYPPEAQTIIVTKGQSLILECVASGIPPPRVTWAKDGSSVTGYNKTRFL    211 - 280
LSNLLIDTTSEEDSGTYRCMADNGVGQPGAAVILYNVQVFEPPEVTMELSQLVIPWGQSAKLTCEVRGNP    281 - 350
PPSVLWLRNAVPLISSQRLRLSRRALRVLSMGPEDEGVYQCMAENEVGSAHAVVQLRTSRPSITPRLWQD    351 - 420
AELATGTPPVSPSKLGNPEQMLRGQPALPRPPTSVGPASPQCPGEKGQGAPAEAPIILSSPRTSKTDSYE    421 - 490
LVWRPRHEGSGRAPILYYVVKHRKVTNSSDDWTISGIPANQHRLTLTRLDPGSLYEVEMAAYNCAGEGQT    491 - 560
AMVTFRTGRRPKPEIMASKEQQIQRDDPGASPQSSSQPDHGRLSPPEAPDRPTISTASETSVYVTWIPRG    561 - 630
NGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGTSYKFRVRALNMLGESEPSAPSRPYV    631 - 700
VSGYSGRVYERPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEG    701 - 770
DKYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARKSSGQPGRLPPPTLAPPQPPLPETIERP    771 - 840
VGTGAMVARSSDLPYLIVGVVLGSIVLIIVTFIPFCLWRAWSKQKHTTDLGFPRSALPPSCPYTMVPLGG    841 - 910
LPGHQASGQPYLSGISGRACANGIHMNRGCPSAAVGYPGMKPQQHCPGELQQQSDTSSLLRQTHLGNGYD    911 - 980
PQSHQITRGPKSSPDEGSFLYTLPDDSTHQLLQPHHDCCQRQEQPAAVGQSGVRRAPDSPVLEAVWDPPF    981 - 1050
HSGPPCCLGLVPVEEVDSPDSCQVSGGDWCPQHPVGAYVGQEPGMQLSPGPLVRVSFETPPLTI         1051 - 1114
//

Text Mined References (20)

PMID Year Title
23535732 2013 Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array.
23259602 2012 Genome-wide association scan of dental caries in the permanent dentition.
22020285 2011 Image-based genome-wide siRNA screen identifies selective autophagy factors.
20519495 2010 All mammalian Hedgehog proteins interact with cell adhesion molecule, down-regulated by oncogenes (CDO) and brother of CDO (BOC) in a conserved manner.
20306291 2010 A three-stage genome-wide association study of general cognitive ability: hunting the small effects.
20053908 2010 Segregation of ipsilateral retinal ganglion cell axons at the optic chiasm requires the Shh receptor Boc.
16959974 2006 The consensus coding sequences of human breast and colorectal cancers.
16647304 2006 The cell surface membrane proteins Cdo and Boc are components and targets of the Hedgehog signaling pathway and feedback network in mice.
16641997 2006 The DNA sequence, annotation and analysis of human chromosome 3.
15923648 2005 Close encounters: regulation of vertebrate skeletal myogenesis by cell-cell contact.
More...