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Tdark Protein FAM47E

This locus represents naturally occurring read-through transcription between the neighboring FAM47E (family with sequence similarity 47, member E) and STBD1 (starch binding domain 1) genes on chromosome 4. The read-through transcript encodes a protein that shares sequence identity with the upstream gene product but its C-terminal region is distinct due to frameshifts relative to the downstream gene. [provided by RefSeq, Jul 2011]

 Comments

Property Summary

NCBI Gene PubMed Count 7
PubMed Score 0.67

Knowledge Summary

Patent

No data available

TINX Plot

  Disease (2)

Disease Target Count P-value
Breast cancer 3578 2.0e-06
Disease Target Count Z-score Confidence
Parkinson's disease 392 0.0 2.1

Expression

  Differential Expression (1)

Disease log2 FC p
Breast cancer -1.900 2.0e-06

Synonym

Accession Q6ZV65 D6R8Y4
Symbols

Gene

FAM47E-STBD1

 UniProt Keyword (4)

 GO Component (1)

 Compartment GO Term (6)

 HCA RNA Cell Line (56)

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AA Sequence 

MADRRRRLRPGTLAPVREGVNCRSRCFTKHKNGLKFPTSLHSRQLVFPRKGLDDFRKGCPPCTGLVTQVP      1 - 70
VEGFLPQIYHRAPQLAPKKRQIKLLKEADVLSKLSPAQQARKAFLEDVEAHLTPHPLALYLNLEEAMPIE     71 - 140
LLSKVLEVLDPDRKLEDTWAYCQDTRKGMKEPTKLLKKHSTQVYLGPSKKTSVSNAGQWLYEEKPHKMDL    141 - 210
LHENGPRPGLHENGISDIDEEFILKQFDIDYETKPSHDALHTMKLNQVPLELKRSVGLSKLQETEFFQKL    211 - 280
GYERKLQKPQNPYKPKWVKMRYGAWYLNPKLWKKQRVDEPLVDPEVSHKAQEENFKKELQEQEELLADLH    281 - 350
GTVAFKDFILSRGYRTPRFLENMYIGKECKRACNKTPIKRTQA                               351 - 393
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Text Mined References (8)

PMID Year Title