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Tdark Synaptosomal-associated protein 47

Plays a role in intracellular membrane fusion.

 Comments

Property Summary

NCBI Gene PubMed Count 8
PubMed Score 16.16
PubTator Score 9.75

Knowledge Summary

Patent

No data available

TINX Plot

  Disease (3)

Disease Target Count P-value
ovarian cancer 8520 2.5e-07
atypical teratoid / rhabdoid tumor 5112 1.1e-05
glioblastoma 5792 1.2e-04
medulloblastoma, large-cell 6241 1.3e-04
Disease Target Count Z-score Confidence
Carcinoma 11493 0.0 0.8
Kidney cancer 2613 0.0 0.5
Disease Target Count Z-score Confidence
Diabetic retinopathy 56 3.089 1.5

Expression

  Differential Expression (4)

Disease log2 FC p
atypical teratoid / rhabdoid tumor -1.100 1.1e-05
glioblastoma -1.200 1.2e-04
medulloblastoma, large-cell -1.100 1.3e-04
ovarian cancer 1.100 2.5e-07

Synonym

Accession Q5SQN1 B6EDE0 Q5HYB5 Q5TBZ3 Q8N558 Q8TB31 Q8TCW8 Q8WV46 Q96CQ3 Q96FE1 Q96I66 Q96NU3 Q9BT10 Q9BVB2 SNAP-47
Symbols SVAP1
HEL170
SNAP-47
C1orf142
ESFI5812
HEL-S-290

Gene

SNAP47

PANTHER Protein Class (2)

  Ortholog (1)

Species Source Disease
Chimp OMA EggNOG

 UniProt Keyword (8)

 GO Function (2)

 GO Component (6)

 GO Process (4)

 Compartment GO Term (18)

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 IMPC Phenotype (4)

 MGI Phenotype (2)

 GWAS Trait (1)

 HCA RNA Cell Line (56)

See all...

Gene RIF (1)

AA Sequence 

MRAARRGLHCAGAERPRRRGRLWDSSGVPQRQKRPGPWRTQTQEQMSRDVCIHTWPCTYYLEPKRRWVTG      1 - 70
QLSLTSLSLRFMTDSTGEILVSFPLSSIVEIKKEASHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIE     71 - 140
HFWRELLLSQPGAVADASVPRTRGEELTGLMAGSQKRLEDTARVLHHQGQQLDSVMRGLDKMESDLEVAD    141 - 210
RLLTELESPAWWPFSSKLWKTPPETKPREDVSMTSCEPFGKEGILIKIPAVISHRTESHVKPGRLTVLVS    211 - 280
GLEIHDSSSLLMHRFEREDVDDIKVHSPYEISIRQRFIGKPDMAYRLISAKMPEVIPILEVQFSKKMELL    281 - 350
EDALVLRSARTSSPAEKSCSVWHAASGLMGRTLHREPPAGDQEGTALHLQTSLPALSEADTQELTQILRR    351 - 420
MKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRLT                              421 - 464
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Text Mined References (11)

PMID Year Title