Property Summary

NCBI Gene PubMed Count 19
PubMed Score 5.79
PubTator Score 1.66

Knowledge Summary

Patent

No data available

TINX Plot

  Disease Sources (3)

Disease Target Count P-value
lung carcinoma 2844 5.40054633754147E-12
posterior fossa group A ependymoma 1511 2.33473239840222E-11
pilocytic astrocytoma 3086 7.06529917177559E-9
pediatric high grade glioma 2712 3.22574459396685E-6
ovarian cancer 8492 3.23799599397949E-6
glioblastoma 5572 5.75871633084559E-5
atypical teratoid / rhabdoid tumor 4369 7.22756094492076E-5
osteosarcoma 7933 2.5087607326623E-4
interstitial cystitis 2299 2.76185712138862E-4
group 3 medulloblastoma 2254 2.88012350193414E-4
psoriasis 6685 0.00240419195236426
intraductal papillary-mucinous carcinoma (IPMC) 2988 0.00684857090211353
pancreatic ductal adenocarcinoma liver metastasis 1795 0.00689430757411752
intraductal papillary-mucinous adenoma (IPMA) 2956 0.00830206717932604
gastric carcinoma 832 0.0178311641025115
subependymal giant cell astrocytoma 2287 0.0399580235228344
Disease Target Count Z-score Confidence
ulcerative colitis 2087 0.0 2.0

Expression

Synonym

Accession Q15035 A8K6T6
Symbols

Gene

  Ortholog (14)

Species Source
Chimp OMA EggNOG
Macaque OMA EggNOG Inparanoid
Mouse OMA EggNOG Inparanoid
Rat OMA EggNOG
Dog OMA EggNOG Inparanoid
Horse OMA EggNOG Inparanoid
Cow OMA EggNOG Inparanoid
Opossum OMA EggNOG Inparanoid
Platypus OMA EggNOG
Chicken OMA EggNOG Inparanoid
Xenopus OMA EggNOG Inparanoid
Zebrafish OMA EggNOG Inparanoid
C. elegans OMA Inparanoid
Fruitfly EggNOG Inparanoid

Pathway (1)

Gene RIF (4)

PMID Text
25957402 results support a role of DAP12 in stabilizing TREM2-CTF, thereby protecting against excessive pro-inflammatory responses.
20379614 Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
19240061 Observational study of gene-disease association. (HuGE Navigator)
14749390 TRAM2, as a part of the translocon, is required for the biosynthesis of type I collagen by coupling the activity of SERCA2b with the activity of the translocon

AA Sequence

MAFRRRTKSYPLFSQEFVIHNHADIGFCLVLCVLIGLMFEVTAKTAFLFILPQYNISVPTADSETVHYHY      1 - 70
GPKDLVTILFYIFITIILHAVVQEYILDKISKRLHLSKVKHSKFNESGQLVVFHFTSVIWCFYVVVTEGY     71 - 140
LTNPRSLWEDYPHVHLPFQVKFFYLCQLAYWLHALPELYFQKVRKEEIPRQLQYICLYLVHIAGAYLLNL    141 - 210
SRLGLILLLLQYSTEFLFHTARLFYFADENNEKLFSAWAAVFGVTRLFILTLAVLAIGFGLARMENQAFD    211 - 280
PEKGNFNTLFCRLCVLLLVCAAQAWLMWRFIHSQLRHWREYWNEQSAKRRVPATPRLPARLIKRESGYHE    281 - 350
NGVVKAENGTSPRTKKLKSP                                                      351 - 370
//

Text Mined References (21)

PMID Year Title
27499293 2016 Inverting the Topology of a Transmembrane Protein by Regulating the Translocation of the First Transmembrane Helix.
26871637 2016 Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.
25957402 2015 DAP12 Stabilizes the C-terminal Fragment of the Triggering Receptor Expressed on Myeloid Cells-2 (TREM2) and Protects against LPS-induced Pro-inflammatory Response.
21697133 2011 Full-length transcriptome analysis of human retina-derived cell lines ARPE-19 and Y79 using the vector-capping method.
21269460 2011 Initial characterization of the human central proteome.
20379614 Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
19240061 2009 Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.
16751776 2006 A germline-specific class of small RNAs binds mammalian Piwi proteins.
16344560 2006 Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.
15790807 2005 Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution.
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