Property Summary

NCBI Gene PubMed Count 15
PubMed Score 29.37
PubTator Score 44.05

Knowledge Summary

Patent

No data available

Expression

  Differential Expression (13)

Disease log2 FC p
astrocytoma 1.200 2.5e-23
glioblastoma 1.400 1.1e-05
oligodendroglioma 1.100 3.5e-13
osteosarcoma -1.398 7.6e-03
posterior fossa group B ependymoma 1.500 4.3e-06
intraductal papillary-mucinous neoplasm ... 1.100 4.3e-02
colon cancer -1.300 1.3e-02
lung cancer -1.500 2.9e-03
Breast cancer 4.100 2.2e-02
pediatric high grade glioma 1.200 2.8e-04
pilocytic astrocytoma 1.100 3.6e-04
subependymal giant cell astrocytoma 1.948 4.3e-02
ovarian cancer -1.500 1.5e-09

Gene RIF (8)

PMID Text
23475391 our study showed, for the first time, that HIF-1alpha was regulated by protein prenylation transferase GGTI and mediated the effect of GGTI on glioma cell migration and invasion
22632162 FITC-labeled Tat 47-59 peptide downregulates gene expression of protein geranylgeranyltransferase type I, beta subunit (PGGT1B) in U-937 macrophages
22160308 our findings identify Geranylgeranyl transferase 1 as a key regulator of human airway smooth muscle cell viability
20446922 RNAi knockdown of GGTase-Ibeta inhibited invasion, disrupted F-actin organization and decreased the level of cofilin in PC-3 cells.
20403997 Observational study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
19667218 Observational study and genome-wide association study of gene-disease association, gene-environment interaction, and pharmacogenomic / toxicogenomic. (HuGE Navigator)
15451670 Results suggest that all peptide substrates adopt a common binding mode in the protein farnesyltransferase and geranylgeranyltransferase active site.
14598891 results suggest that geranylgeranylation of RhoA is critical for cancer cell invasion

AA Sequence

MAATEDERLAGSGEGERLDFLRDRHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKD      1 - 70
DIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDLS     71 - 140
RVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGL    141 - 210
AQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKRWCIMRQQNGYHGRPNKPVDTCYSFWVGATL    211 - 280
KLLKIFQYTNFEKNRNYILSTQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEESGICKVHPALNVSTRT    281 - 350
SERLLDLHQSWKTKDSKQCSENVHIST                                               351 - 377
//

Text Mined References (17)

PMID Year Title
23475391 2013 Geranylgeranyltransferase I regulates HIF-1? promoting glioblastoma cell migration and invasion.
22160308 2012 Geranylgeranyl transferase 1 modulates autophagy and apoptosis in human airway smooth muscle.
21269460 2011 Initial characterization of the human central proteome.
20446922 2010 Inhibition of GGTase-I and FTase disrupts cytoskeletal organization of human PC-3 prostate cancer cells.
20403997 2010 Genetic variation in 3-hydroxy-3-methylglutaryl CoA reductase modifies the chemopreventive activity of statins for colorectal cancer.
19667218 2009 Genome-wide scan of 500,000 single-nucleotide polymorphisms among responders and nonresponders to interferon beta therapy in multiple sclerosis.
16893176 2006 Conversion of protein farnesyltransferase to a geranylgeranyltransferase.
16344560 2006 Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.
15451670 2004 Crystallographic analysis of CaaX prenyltransferases complexed with substrates defines rules of protein substrate selectivity.
15372022 2004 The DNA sequence and comparative analysis of human chromosome 5.
14702039 2004 Complete sequencing and characterization of 21,243 full-length human cDNAs.
14598891 2003 Selective inhibition of cancer cell invasion by a geranylgeranyltransferase-I inhibitor.
12477932 2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
11076863 2000 DNA cloning using in vitro site-specific recombination.
8106351 1994 cDNA cloning and expression of rat and human protein geranylgeranyltransferase type-I.
7713879 1995 CAAX geranylgeranyl transferase transfers farnesyl as efficiently as geranylgeranyl to RhoB.
1400319 1992 Post-translational modifications of p21rho proteins.