Uncharacterized protein C9orf50

Property Summary

NCBI Gene PubMed Count	6
PubMed Score	0.38

PubTator Score	0.33

Knowledge Summary

Patent

No data available

TINX Plot

Disease (1)

JensenLab Experiment COSMIC

Disease	Target Count	Z-score	Confidence
Carcinoma	11493	0.0	0.5

Expression

Specificity
Differential

Testis 18,518

Nerve - Tibial 18,007

Brain - Cerebellar Hemisphere 18,015

Brain - Cerebellum 17,983

Brain - Hypothalamus 18,169

Artery - Aorta 17,896

Brain - Amygdala 18,006

Brain - Cortex 18,039

Brain - Frontal Cortex (BA9) 18,069

Brain - Spinal cord (cervical c-1) 17,973

Brain - Substantia nigra 17,981

Brain - Anterior cingulate cortex (BA24) 17,989

Brain - Nucleus accumbens (basal ganglia... 18,024

Brain - Caudate (basal ganglia) 18,001

Brain - Hippocampus 18,011

Colon - Sigmoid 18,089

Brain - Putamen (basal ganglia) 17,863

Prostate 18,213

Artery - Coronary 17,949

Esophagus - Gastroesophageal Junction 18,000

Esophagus - Muscularis 18,017

Pituitary 18,147

Vagina 17,834

Kidney - Cortex 17,329

Cells - Transformed fibroblasts 17,577

Thyroid 18,024

Spleen 17,614

Uterus 17,618

Stomach 17,879

Artery - Tibial 17,631

Breast - Mammary Tissue 18,103

Skin - Sun Exposed (Lower leg) 17,968

Minor Salivary Gland 18,005

Ovary 17,971

Adipose - Subcutaneous 18,110

Skin - Not Sun Exposed (Suprapubic) 18,081

Adrenal Gland 18,071

Lung 18,057

Adipose - Visceral (Omentum) 17,937

Small Intestine - Terminal Ileum 17,954

Colon - Transverse 17,825

Heart - Atrial Appendage 17,896

Esophagus - Mucosa 18,076

Cells - EBV-transformed lymphocytes 18,186

Liver 18,071

Heart - Left Ventricle 18,006

Whole Blood 17,439

Pancreas 18,123

Muscle - Skeletal 17,778

Adult Pancreas 9,168

Pancreas

adrenal gland 15,963

appendix 16,247

bone marrow 14,571

breast 16,063

cerebral cortex 16,630

cervix, uterine 15,871

colon 15,959

endometrium 16,349

epididymis 15,863

fallopian tube 16,245

gallbladder 16,333

kidney 15,917

lung 16,312

lymph node 15,833

ovary 15,408

parathyroid gland 14,769

placenta 15,937

prostate 16,460

salivary gland 14,981

seminal vesicle 15,918

small intestine 16,154

smooth muscle 15,857

spleen 15,972

stomach 16,099

testis 17,936

thyroid gland 15,959

urinary bladder 15,814

Liver and Pancreas 16,750

Digestive Tract 17,369

Urinary Tract 16,678

Endocrine System 18,159

Blood and immune system 16,909

Respiratory system 16,393

Female tissues 17,400

Male tissues 17,142

Skin and soft tissues 17,230

Nervous System 16,725

Synonym

Accession	Q5SZB4 Q2M1I2 Q8NA65
Symbols

Gene

C9orf50

Ortholog (5)

Species	Source	Disease
Chimp 14,140	OMA EggNOG
Macaque 12,761	OMA EggNOG
Mouse 16,570	Inparanoid OMA EggNOG
Rat 15,117	Inparanoid OMA EggNOG
Cow 15,320	Inparanoid OMA EggNOG

UniProt Keyword (3)

Complete proteome 20,231

Polymorphism 12,194

Reference proteome 20,231

Compartment GO Term (1)

cellular_component 18,320

HCA RNA Cell Line (34)

A-431 16,131

A549 15,174

AF22 16,160

AN3-CA 15,648

ASC TERT1 14,842

BJ 15,448

BJ hTERT+ 15,353

BJ hTERT+ SV40 Large T+ 15,609

BJ hTERT+ SV40 Large T+ RasG12V 15,493

CAPAN-2 16,102

See all...

AA Sequence

MFWRRLRPGAQDLAPKGLPGDGDFRRSSDPRLPKLTPPALRAALGARGSGDWRIPGGGAAWWPEGDAKPG      1 - 70
VGVGRLPPRLPALLTATRRAVRKRGLLRSLLPPPLLSAGASRESAPRQPGPGERERPRRRVAREDPDFLG     71 - 140
AFLGELLPSRFREFLHQLQEKCAEEPEPLTSPAPQHQRGVLEHCPGSPRCPNCSFLPDLWGQSSHLQDSL    141 - 210
TKISLQQTPILGPLKGDHSQFTTVRKANHRPHGAQVPRLKAALTHNPSGEGSRPCRQRCPFRVRFADETL    211 - 280
QDTTLRYWERRRSVQQSVIVNQKAALPVASERVFGSVGKRLESLPKALYPGAKEETLASSSCWDCAGLST    281 - 350
QKTQGYLSEDTSMNSSLPFCSWKKAAAQRPRSSLRAFLDPHRNLEQESLLPNRVLQSVLKQGCPKGYHLL    351 - 420
LASATLQPDKR                                                               421 - 431
//

Text Mined References (8)

Summary
Details

	PMID	Year	Title