Property Summary

NCBI Gene PubMed Count 3
PubMed Score 4.30
PubTator Score 0.70

Knowledge Summary

Patent

No data available

TINX Plot

  Disease Sources (2)

Disease Target Count P-value
osteosarcoma 7933 2.50650320286048E-7
tuberculosis and treatment for 3 months 327 5.09602877818965E-7
chronic lymphosyte leukemia 232 2.01996819854707E-4
interstitial cystitis 2299 0.00178626618393427
Disease Target Count Z-score Confidence
Renovascular hypertension 1 3.556 1.8

Expression

  Differential Expression (4)

Disease log2 FC p
osteosarcoma -2.355 0.000
chronic lymphosyte leukemia 1.100 0.000
tuberculosis and treatment for 3 months 1.500 0.000
interstitial cystitis 1.500 0.002

Synonym

Accession C9JE40
Symbols Pat1a
hPat1a

Gene

  Ortholog (11)

Species Source
Chimp OMA EggNOG
Macaque OMA EggNOG
Mouse OMA EggNOG Inparanoid
Rat OMA EggNOG Inparanoid
Dog OMA EggNOG Inparanoid
Cow OMA EggNOG Inparanoid
Opossum EggNOG Inparanoid
Platypus OMA EggNOG
Chicken OMA EggNOG
Anole lizard EggNOG Inparanoid
Xenopus EggNOG Inparanoid

AA Sequence

MNCLEGPGKTCGPLASEEELVSACQLEKEEENEGEEEEEEEDEEDLDPDLDPDLEEEENDLGDPAVLGAV      1 - 70
HNTQRALLSSPGVKAPGMLGMSLASLHFLWQTLDYLSPIPFWPTFPSTSSPAQHFGPRLPSPDPTLFCSL     71 - 140
LTSWPPRFSHLTQLHPRHQRILQQQQHSQTPSPPAKKPWSQQPDPYANLMTRKEKDWVIKVQMVQLQSAK    141 - 210
PRLDDYYYQEYYQKLEKKQADEELLGRRNRVESLKLVTPYIPKAEAYESVVRIEGSLGQVAVSTCFSPRR    211 - 280
AIDAVPHGTQEQDIEAASSQRLRVLYRIEKMFLQLLEIEEGWKYRPPPPCFSEQQSNQVEKLFQTLKTQE    281 - 350
QNNLEEAADGFLQVLSVRKGKALVARLLPFLPQDQAVTILLAITHHLPLLVRRDVADQALQMLFKPLGKC    351 - 420
ISHLTLHELLQGLQGLTLLPPGSSERPVTVVLQNQFGISLLYALLSHGEQLVSLHSSLEEPNSDHTAWTD    421 - 490
MVVLIAWEIAQMPTASLAEPLAFPSNLLPLFCHHVDKQLVQQLEARMEFAWIY                     491 - 543
//

Text Mined References (4)

PMID Year Title
20584987 2010 Human Pat1b connects deadenylation with mRNA decapping and controls the assembly of processing bodies.
17936923 2007 Identification of PatL1, a human homolog to yeast P body component Pat1.
16572171 2006 Analysis of the DNA sequence and duplication history of human chromosome 15.
12477932 2002 Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.